HHsearch alignment for GI: 254781047 and conserved domain: PRK08181
>PRK08181 transposase; Validated.
Probab=98.96 E-value=9.3e-09 Score=75.65 Aligned_cols=142 Identities=18% Similarity=0.237 Sum_probs=96.8
Q ss_pred CCCEEEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCEEE
Q ss_conf 88649988888772899999999857811146888999999999999997131122466557807899999961387999
Q gi|254781047|r 65 SMQGIYLHGDVGQGKSMLMNLFFALVPIEKKCRLHFYEFMKDVHSRIIMYRKKIEFGEILESDPIPLVASSIALESRVLC 144 (404)
Q Consensus 65 ~~kGlYL~G~VG~GKT~LMdlFy~~l~~~~K~R~HFh~FM~~ih~~l~~~~~~~~~~~~~~~dpl~~va~~l~~~~~lLC 144 (404)
T Consensus 105 ~~~Nvil~Gp~GtGKThLA~Alg~~A~-~~G~~V~f~~~~~-L~~~L~~a~~---------~~~~~~~~~~l-~~~dLLI 172 (269)
T PRK08181 105 KGANLLLFGPPGGGKSHLAAAIGLALI-ENGWRVLFTRTTD-LVQKLQVARR---------ELQLESAIAKL-DKFDLLI 172 (269)
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHH-HCCCEEEEEEHHH-HHHHHHHHHH---------CCCHHHHHHHH-HCCCEEE
T ss_conf 487089989999878899999999999-8799399978999-9999999775---------58399999997-4446012
Q ss_pred EEEEEECCC--HHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHCCCCCHHHHHHHHHHHHHCCEEEECCCCCHHHHCC
Q ss_conf 842320471--3588899999999854968998178686775238740566898999998505089804731122112
Q gi|254781047|r 145 FDEFMITNI--ADAIILSRLFAALFSHGCIIVMTSNFIPENLYKDEINRNVLVSFIELLEKKLEIISLDSGQDYRRKE 220 (404)
Q Consensus 145 fDEF~V~Di--aDAmil~rl~~~lf~~gv~lV~TSN~~P~dLY~~GLqR~~FlPfI~~lk~~~~V~~l~~~~DYR~~~ 220 (404)
T Consensus 173 iDe~G~~~~~~~~~~~lf~lI~~Rye~~-S~IITSn~~~~~W~~~f~D~~la~AiLDRLvH~a~~i~l~G-eSyR~k~ 248 (269)
T PRK08181 173 LDDLAYVTKDQAETSVLFELISARYERR-SILITANQPFGEWNRVFPDPAMTLAAVDRLVHHATIFEMNV-ESYRRRT 248 (269)
T ss_pred EHHCCCCCCCHHHHHHHHHHHHHHHCCC-CEEEECCCCHHHHHHHCCCHHHHHHHHHHHHCCEEEEEECC-CCCCCHH
T ss_conf 2010566799899999999999985788-88998899977887753868899999998701528997558-7612056