HHsearch alignment for GI: 254781047 and conserved domain: PRK08769
>PRK08769 DNA polymerase III subunit delta'; Validated.
Probab=91.95 E-value=0.46 Score=26.79 Aligned_cols=135 Identities=13% Similarity=0.078 Sum_probs=72.4
Q ss_pred CCCEEEEECCCCCCHHHHHHHHHHHCCCCH-----HHHHHHHHHHHHHHHHHHHHHC--CCCCCCCCCCCHHH---HHHH
Q ss_conf 886499888887728999999998578111-----4688899999999999999713--11224665578078---9999
Q gi|254781047|r 65 SMQGIYLHGDVGQGKSMLMNLFFALVPIEK-----KCRLHFYEFMKDVHSRIIMYRK--KIEFGEILESDPIP---LVAS 134 (404)
Q Consensus 65 ~~kGlYL~G~VG~GKT~LMdlFy~~l~~~~-----K~R~HFh~FM~~ih~~l~~~~~--~~~~~~~~~~dpl~---~va~ 134 (404)
T Consensus 25 l~HA~Lf~Gp~G~GK~~~A~~~A~~llc~~~~~~~~~~~~-~~i~~g~HPD~~~i~~~~~~~~~k~k~~I~IdqiR~l~~ 103 (319)
T PRK08769 25 LGHGLLICGPEGLGKRAVALALAEHVLASGPDPALAQRTR-QLIAAGTHPDLQLVSFIPNRTGDKLRTEIVIEQVREISQ 103 (319)
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHH-HHHHCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 4206875899987899999999999837997976543388-999668998968775344445431123486999999999
Q ss_pred H-----HHCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHCCCCCHHHHHHHHHHHHHCCEEEE
Q ss_conf 9-----96138799984232047135888999999998549689981786867752387405668989999985050898
Q gi|254781047|r 135 S-----IALESRVLCFDEFMITNIADAIILSRLFAALFSHGCIIVMTSNFIPENLYKDEINRNVLVSFIELLEKKLEIIS 209 (404)
Q Consensus 135 ~-----l~~~~~lLCfDEF~V~DiaDAmil~rl~~~lf~~gv~lV~TSN~~P~dLY~~GLqR~~FlPfI~~lk~~~~V~~ 209 (404)
T Consensus 104 ~~~~~p~~g~~KV~IId~Ad~mn~~AaNalLK~LEEP-p~~~~~iL~~~-~~~~l-------------l~TI~SRCq~~~ 168 (319)
T PRK08769 104 KLALTPQYGIAQVVIVDPADAINRSACNALLKTLEEP-SPGRYLWLISA-QPARL-------------PATIRSRCQRLE 168 (319)
T ss_pred HHHHCCCCCCCEEEEECCHHHCCHHHHHHHHHHHCCC-CCCEEEEEEEC-CHHHC-------------CHHHHHCCEEEC
T ss_conf 9613720279569998066752899999999982279-98848999869-93658-------------247764850111
Q ss_pred CCCCCH
Q ss_conf 047311
Q gi|254781047|r 210 LDSGQD 215 (404)
Q Consensus 210 l~~~~D 215 (404)
T Consensus 169 ~~~p~~ 174 (319)
T PRK08769 169 FKLPPA 174 (319)
T ss_pred CCCCCH
T ss_conf 899699