HHsearch alignment for GI: 254781047 and conserved domain: PRK10820
>PRK10820 DNA-binding transcriptional regulator TyrR; Provisional.
Probab=95.34 E-value=0.073 Score=31.88 Aligned_cols=115 Identities=16% Similarity=0.149 Sum_probs=63.3
Q ss_pred CCCEEEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHH--HHHH-HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCC
Q ss_conf 8864998888877289999999985781114688899--9999-999999997131122466557807899999961387
Q gi|254781047|r 65 SMQGIYLHGDVGQGKSMLMNLFFALVPIEKKCRLHFY--EFMK-DVHSRIIMYRKKIEFGEILESDPIPLVASSIALESR 141 (404)
Q Consensus 65 ~~kGlYL~G~VG~GKT~LMdlFy~~l~~~~K~R~HFh--~FM~-~ih~~l~~~~~~~~~~~~~~~dpl~~va~~l~~~~~ 141 (404)
T Consensus 226 ~d~pVLI~GEsGTGKellAraIH~~S~R~~~pFv~vnC~alp~~l~eseLFG~a~~-------~~~G~f----e-~A~gG 293 (513)
T PRK10820 226 LSAPLLITGDTGTGKDLFAYACHLASPRAKKPYLALNCASIPEDAVESELFGHAPE-------GKKGFF----E-QANGG 293 (513)
T ss_pred CCCCEEEECCCCCCHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHCCCCCC-------CCCCCE----E-ECCCC
T ss_conf 89988998989824999999999668878998268889989967899986387666-------889755----7-85898
Q ss_pred EEEEEEEEECCCHHHHHHHHHHHHHHHC-------------CCEEEEECCCCHHHHHCCCCCHHHH
Q ss_conf 9998423204713588899999999854-------------9689981786867752387405668
Q gi|254781047|r 142 VLCFDEFMITNIADAIILSRLFAALFSH-------------GCIIVMTSNFIPENLYKDEINRNVL 194 (404)
Q Consensus 142 lLCfDEF~V~DiaDAmil~rl~~~lf~~-------------gv~lV~TSN~~P~dLY~~GLqR~~F 194 (404)
T Consensus 294 TLfLdEI~~l~~~---~Q~kLLr~Lq~~~~~rvG~~~~~~~dvRiIaaT~~dL~~lv~~g~FReDL 356 (513)
T PRK10820 294 SVLLDEIGEMSPR---MQAKLLRFLNDGTFRRVGEDHEVHVDVRVICATQKNLVELVQKGLFREDL 356 (513)
T ss_pred EEEEECHHHCCHH---HHHHHHHHHHCCEEEECCCCCEEEEEEEEEECCCHHHHHHHHCCCCCHHH
T ss_conf 8999783659999---99999999868979965998535677899962653099998729850889