HHsearch alignment for GI: 254781047 and conserved domain: PRK11247
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional.
Probab=92.64 E-value=0.76 Score=25.42 Aligned_cols=115 Identities=19% Similarity=0.223 Sum_probs=65.2
Q ss_pred EEEEECCCCCCHHHHHHHHHHHCCCCH---------------HHHHHHHHH-----H---------------HHHHHHHH
Q ss_conf 499888887728999999998578111---------------468889999-----9---------------99999999
Q gi|254781047|r 68 GIYLHGDVGQGKSMLMNLFFALVPIEK---------------KCRLHFYEF-----M---------------KDVHSRII 112 (404)
Q Consensus 68 GlYL~G~VG~GKT~LMdlFy~~l~~~~---------------K~R~HFh~F-----M---------------~~ih~~l~ 112 (404)
T Consensus 40 iv~LiG~nGaGKSTLlr~i~Gl~~p~~G~I~~~~~~i~~~~~~i~~vfQ~~~l~~~~tV~eni~~gl~~~~~~~~~e~l~ 119 (257)
T PRK11247 40 FVAVVGRSGCGKSTLLRLLAGLETPTAGDLLAGTAPLAEAQEDTRLMFQDARLLPWKKVIDNVGLGLKGQWRDAALQALA 119 (257)
T ss_pred EEEEECCCCCHHHHHHHHHHCCCCCCCCEEEECCEEHHHHHHCEEEEECCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHH
T ss_conf 99999899888999999996589888870898987554431100799325644767789999863214106999999999
Q ss_pred HHH-----CCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEE-EECCCHHHHHHHHHHHHHH-HCCCEEEEECCCCHH
Q ss_conf 971-----311224665578078999999613879998423-2047135888999999998-549689981786867
Q gi|254781047|r 113 MYR-----KKIEFGEILESDPIPLVASSIALESRVLCFDEF-MITNIADAIILSRLFAALF-SHGCIIVMTSNFIPE 182 (404)
Q Consensus 113 ~~~-----~~~~~~~~~~~dpl~~va~~l~~~~~lLCfDEF-~V~DiaDAmil~rl~~~lf-~~gv~lV~TSN~~P~ 182 (404)
T Consensus 120 ~vgL~~~~~~~p~~LSGGqkQRvaiAraL~~~P~lLlLDEPtsgLD~~~~~~i~~ll~~L~~e~g~TIi~vTHdl~e 196 (257)
T PRK11247 120 AVGLADRANEWPAALSGGQKQRVALARALIHRPRLLLLDEPLGALDALTRIEMQDLIESLWQQHGFTVLLVTHDVSE 196 (257)
T ss_pred HCCCCHHHHCCHHHCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCHHH
T ss_conf 85991355369444899999999999998459999998098765799999999999999999609899998879999