HHsearch alignment for GI: 254781047 and conserved domain: PRK12377

>PRK12377 putative replication protein; Provisional.
Probab=98.78  E-value=5.8e-07  Score=64.24  Aligned_cols=139  Identities=13%  Similarity=0.141  Sum_probs=87.3

Q ss_pred             CCCEEEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCEEE
Q ss_conf             88649988888772899999999857811146888999999999999997131122466557807899999961387999
Q gi|254781047|r   65 SMQGIYLHGDVGQGKSMLMNLFFALVPIEKKCRLHFYEFMKDVHSRIIMYRKKIEFGEILESDPIPLVASSIALESRVLC  144 (404)
Q Consensus        65 ~~kGlYL~G~VG~GKT~LMdlFy~~l~~~~K~R~HFh~FM~~ih~~l~~~~~~~~~~~~~~~dpl~~va~~l~~~~~lLC  144 (404)
T Consensus       100 ~~~NlIf~G~pGtGKTHLA~AIg~~a~~~-G~sVlF~t~-~dLv~~L~~a~~~g--------~~~~k~l~~l-~~~dLLI  168 (248)
T PRK12377        100 GCTNFVFSGKPGTGKNHLAAAIGNRLLAK-GRSVIVVTV-PDVMSRLHESYDNG--------QSGEKFLQEL-CKVDLLV  168 (248)
T ss_pred             CCCEEEEECCCCCCHHHHHHHHHHHHHHC-CCEEEEEEH-HHHHHHHHHHHHCC--------CCHHHHHHHH-HCCCEEE
T ss_conf             88608998999987889999999999987-996999889-99999999999848--------5099999997-3389898


Q ss_pred             EEEEEEC--CCHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHCCCCCHHHHHHHHHHHH-HCCEEEECCCCCHHHHCC
Q ss_conf             8423204--713588899999999854968998178686775238740566898999998-505089804731122112
Q gi|254781047|r  145 FDEFMIT--NIADAIILSRLFAALFSHGCIIVMTSNFIPENLYKDEINRNVLVSFIELLE-KKLEIISLDSGQDYRRKE  220 (404)
Q Consensus       145 fDEF~V~--DiaDAmil~rl~~~lf~~gv~lV~TSN~~P~dLY~~GLqR~~FlPfI~~lk-~~~~V~~l~~~~DYR~~~  220 (404)
T Consensus       169 IDElG~~~~s~~~~~llfqlI~~Ry~~~ks~IiTTNL~f~ew~~--ilgd---ailDRL~~h~~~~i~f~-GeSYRk~i  241 (248)
T PRK12377        169 LDEIGIQRETKNEQVVLNQIIDRRTASMRSVGMLTNLNHEAMST--LLGE---RVMDRMTMNGGRWVNFN-WESWRPNV  241 (248)
T ss_pred             EHHCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHH--HHHH---HHHHHHHHCCCEEEEEE-CCCCCCCC
T ss_conf             60005788986799999999999985579868975899779988--8759---99999986693499861-73111357