HHsearch alignment for GI: 254781047 and conserved domain: PRK12422
>PRK12422 chromosomal replication initiation protein; Provisional.
Probab=99.15 E-value=9.5e-10 Score=81.96 Aligned_cols=103 Identities=22% Similarity=0.323 Sum_probs=78.3
Q ss_pred CEEEEECCCCCCHHHHHHHHHHHCCCCHHHHHHH---HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCEE
Q ss_conf 6499888887728999999998578111468889---9999999999999713112246655780789999996138799
Q gi|254781047|r 67 QGIYLHGDVGQGKSMLMNLFFALVPIEKKCRLHF---YEFMKDVHSRIIMYRKKIEFGEILESDPIPLVASSIALESRVL 143 (404)
Q Consensus 67 kGlYL~G~VG~GKT~LMdlFy~~l~~~~K~R~HF---h~FM~~ih~~l~~~~~~~~~~~~~~~dpl~~va~~l~~~~~lL 143 (404)
T Consensus 142 NPLfIyG~~GlGKTHLL~AIgn~i~~~~-~kV~Yvtae~F~~~~v~ai~---~----------~~~~~Fr~~y-r~~DvL 206 (455)
T PRK12422 142 NPIYLFGPEGSGKTHLMQAAVSALRESG-GKILYVSSELFTEHLVSAIR---S----------GEMQRFRSFY-RNVDAL 206 (455)
T ss_pred CCEEEECCCCCCHHHHHHHHHHHHHCCC-CEEEEECHHHHHHHHHHHHH---C----------CCHHHHHHHH-HCCCEE
T ss_conf 8758878999978999999999853799-86999749999999999997---5----------8899999999-638877
Q ss_pred EEEEEEECC--CHHHHHHHHHHHHHHHCCCEEEEECCCCHHHH
Q ss_conf 984232047--13588899999999854968998178686775
Q gi|254781047|r 144 CFDEFMITN--IADAIILSRLFAALFSHGCIIVMTSNFIPENL 184 (404)
Q Consensus 144 CfDEF~V~D--iaDAmil~rl~~~lf~~gv~lV~TSN~~P~dL 184 (404)
T Consensus 207 LIDDIQfl~gK~~tqeEff~tfN~L~~~~KQIVitsDr~P~el 249 (455)
T PRK12422 207 FIEDIEVFSGKGATQEEFFHTFNSLHTEGKLIVISSSYAPGDL 249 (455)
T ss_pred EEEHHHHHHCCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHH
T ss_conf 6314788728488999999999999985996999689895765