HHsearch alignment for GI: 254781047 and conserved domain: TIGR02546

>TIGR02546 III_secr_ATP type III secretion apparatus H+-transporting two-sector ATPase; InterPro: IPR013380 Proteins in this entry are found in a variety of bacteria, and are predicted to be ATPases involved in type III secretion systems. One example is YscN (P40290 from SWISSPROT) from Yersinia enterocolitica, which is thought to energise the YOP (Yersinia outer protein) secretion system .; GO: 0046961 hydrogen ion transporting ATPase activity rotational mechanism, 0030254 protein secretion by the type III secretion system.
Probab=90.58  E-value=0.18  Score=29.43  Aligned_cols=27  Identities=26%  Similarity=0.267  Sum_probs=22.7

Q ss_pred             CCEEEEECCCCCCHHHHHHHHHHHCCC
Q ss_conf             864998888877289999999985781
Q gi|254781047|r   66 MQGIYLHGDVGQGKSMLMNLFFALVPI   92 (404)
Q Consensus        66 ~kGlYL~G~VG~GKT~LMdlFy~~l~~   92 (404)
T Consensus       153 GQRiGIFA~aG~GKSTLL~~i~~g~~A  179 (430)
T TIGR02546       153 GQRIGIFAGAGVGKSTLLGMIARGASA  179 (430)
T ss_pred             CCEEEEEECCCCCHHHHHHHHHCCCCC
T ss_conf             530578708886166899998618988