>TIGR02639 ClpA ATP-dependent Clp protease ATP-binding subunit ClpA; InterPro: IPR013461 Proteins in this entry are related to ClpA () from Escherichia coli. ClpA is an ATP-dependent chaperone and part of the ClpAP protease that participates in regulatory protein degradation and the dissolution and degradation of protein aggregates . ClpA recognises sequences in specific proteins, which it then unfolds in an ATP-dependent manner and transports into the degradation chamber of the associated ClpP protein , . A small adaptor-like protein, ClpS, modulates the activity of ClpA and is an important regulatory factor for this protein . It protects ClpA from autodegradation and appears to redirect its activity away from soluble proteins and toward aggregated proteins..

Probab=97.16 E-value=0.0025 Score=41.18 Aligned_cols=107 Identities=22% Similarity=0.287 Sum_probs=59.5 Q ss_pred CCCCCCCEEEE-ECCCCCCHHHHHHHHHHHCCCCHHHHHHHHHH-HHHHHHHHHHHH------CCCCCCCCCCCCHHHHH Q ss_conf 66668864998-88887728999999998578111468889999-999999999971------31122466557807899 Q gi|254781047|r 61 RKYCSMQGIYL-HGDVGQGKSMLMNLFFALVPIEKKCRLHFYEF-MKDVHSRIIMYR------KKIEFGEILESDPIPLV 132 (404) Q Consensus 61 ~~~~~~kGlYL-~G~VG~GKT~LMdlFy~~l~~~~K~R~HFh~F-M~~ih~~l~~~~------~~~~~~~~~~~dpl~~v 132 (404) T Consensus 521 ~~~nkP~GSFLF~GPTGVGKTElak~LA~------~LGv~l~RFDMSEYmEKHTVsRLIGsPPGYVGfEqGGL---LT-- 589 (774) T TIGR02639 521 GEPNKPVGSFLFVGPTGVGKTELAKQLAE------ELGVHLLRFDMSEYMEKHTVSRLIGSPPGYVGFEQGGL---LT-- 589 (774) T ss_pred CCCCCCEEEEEEECCCCCCHHHHHHHHHH------HHCCHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC---CH-- T ss_conf 77888168888647989625788999999------70820010465044689999874168888513167772---12-- Q ss_pred HHHHHCC-CCEEEEEEEEECCCHHHHHHHHHHHHHHH--------------CCCEEEEECCCCHHH Q ss_conf 9999613-87999842320471358889999999985--------------496899817868677 Q gi|254781047|r 133 ASSIALE-SRVLCFDEFMITNIADAIILSRLFAALFS--------------HGCIIVMTSNFIPEN 183 (404) Q Consensus 133 a~~l~~~-~~lLCfDEF~V~DiaDAmil~rl~~~lf~--------------~gv~lV~TSN~~P~d 183 (404) T Consensus 590 -~AvrK~P~cVLLLDEIEK---AHpDI~NILLQVM-D~AtLTDN~GrKaDFRNVILIMTSNaGa~E 650 (774) T TIGR02639 590 -DAVRKHPHCVLLLDEIEK---AHPDIYNILLQVM-DYATLTDNNGRKADFRNVILIMTSNAGARE 650 (774) T ss_pred -HHHCCCCCEEEHHHHHHH---HHHHHHHHHHHHH-CCCEEECCCCCEEEECCEEEEECCCCCCCC T ss_conf -233128853542346666---3133666787663-354340588857631136888403700102

HHsearch alignment for GI: 254781047 and conserved domain: TIGR02639