HHsearch alignment for GI: 254781047 and conserved domain: cd03217
>cd03217 ABC_FeS_Assembly ABC-type transport system involved in Fe-S cluster assembly, ATPase component. Biosynthesis of iron-sulfur clusters (Fe-S) depends on multiprotein systems. The SUF system of E. coli and Erwinia chrysanthemi is important for Fe-S biogenesis under stressful conditions. The SUF system is made of six proteins: SufC is an atypical cytoplasmic ABC-ATPase, which forms a complex with SufB and SufD; SufA plays the role of a scaffold protein for assembly of iron-sulfur clusters and delivery to target proteins; SufS is a cysteine desulfurase which mobilizes the sulfur atom from cysteine and provides it to the cluster; SufE has no associated function yet.
Probab=94.30 E-value=0.22 Score=28.89 Aligned_cols=107 Identities=16% Similarity=0.134 Sum_probs=64.0
Q ss_pred EEEEECCCCCCHHHHHHHHHHHC---CCC--------------HHHHHHHHHHHH----------HHHHHHHHHHCCCCC
Q ss_conf 49988888772899999999857---811--------------146888999999----------999999997131122
Q gi|254781047|r 68 GIYLHGDVGQGKSMLMNLFFALV---PIE--------------KKCRLHFYEFMK----------DVHSRIIMYRKKIEF 120 (404)
Q Consensus 68 GlYL~G~VG~GKT~LMdlFy~~l---~~~--------------~K~R~HFh~FM~----------~ih~~l~~~~~~~~~ 120 (404)
T Consensus 28 i~~iiGpnGaGKSTLl~~i~G~~~~~~~~G~I~~~g~~i~~~~~~~~~~~gi~~~~q~~~~~~~~~~~~~l~~~~~~LS- 106 (200)
T cd03217 28 VHALMGPNGSGKSTLAKTIMGHPKYEVTEGEILFKGEDITDLPPEERARLGIFLAFQYPPEIPGVKNADFLRYVNEGFS- 106 (200)
T ss_pred EEEEECCCCCCHHHHHHHHCCCCCCCCCCCEEEECCEECCCCCHHHHHHCCEEEECCCHHHCCCCCHHHHHHHHCCCCC-
T ss_conf 9999968999999999997077777852007999999988699999997694896367687079849999976463679-
Q ss_pred CCCCCCCHHHHHHHHHHCCCCEEEEEEE-EECCCHHHHHHHHHHHHHHHCCCEEEEECC
Q ss_conf 4665578078999999613879998423-204713588899999999854968998178
Q gi|254781047|r 121 GEILESDPIPLVASSIALESRVLCFDEF-MITNIADAIILSRLFAALFSHGCIIVMTSN 178 (404)
Q Consensus 121 ~~~~~~dpl~~va~~l~~~~~lLCfDEF-~V~DiaDAmil~rl~~~lf~~gv~lV~TSN 178 (404)
T Consensus 107 ---GGekqrv~iaral~~~P~lllLDEPtsgLD~~~~~~i~~~i~~l~~~g~tiiiitH 162 (200)
T cd03217 107 ---GGEKKRNEILQLLLLEPDLAILDEPDSGLDIDALRLVAEVINKLREEGKSVLIITH 162 (200)
T ss_pred ---HHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEE
T ss_conf ---99999999999996099999996962269999999999999999857999999996