HHsearch alignment for GI: 254781047 and conserved domain: cd03221

>cd03221 ABCF_EF-3 ABCF_EF-3 Elongation factor 3 (EF-3) is a cytosolic protein required by fungal ribosomes for in vitro protein synthesis and for in vivo growth. EF-3 stimulates the binding of the EF-1: GTP: aa-tRNA ternary complex to the ribosomal A site by facilitated release of the deacylated tRNA from the E site. The reaction requires ATP hydrolysis. EF-3 contains two ATP nucleotide binding sequence (NBS) motifs. NBSI is sufficient for the intrinsic ATPase activity. NBSII is essential for the ribosome-stimulated functions.
Probab=95.01  E-value=0.075  Score=31.79  Aligned_cols=100  Identities=16%  Similarity=0.126  Sum_probs=61.9

Q ss_pred             CCEEEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCEEEE
Q ss_conf             86499888887728999999998578111468889999999999999971311224665578078999999613879998
Q gi|254781047|r   66 MQGIYLHGDVGQGKSMLMNLFFALVPIEKKCRLHFYEFMKDVHSRIIMYRKKIEFGEILESDPIPLVASSIALESRVLCF  145 (404)
Q Consensus        66 ~kGlYL~G~VG~GKT~LMdlFy~~l~~~~K~R~HFh~FM~~ih~~l~~~~~~~~~~~~~~~dpl~~va~~l~~~~~lLCf  145 (404)
T Consensus        26 ge~~~l~G~NGsGKTTl~~~l~G~~~~~~-G~i~~~~--~~~i~y~~QL----S----gGqkqr~~la~al~~~p~iliL   94 (144)
T cd03221          26 GDRIGLVGRNGAGKSTLLKLIAGELEPDE-GIVTWGS--TVKIGYFEQL----S----GGEKMRLALAKLLLENPNLLLL   94 (144)
T ss_pred             CCEEEEECCCCCCHHHHHHHHHCCCCCCC-EEEEECC--CCEEEEEHHC----C----HHHHHHHHHHHHHCCCCCEEEE
T ss_conf             99999998999849999999848988985-0999999--6089987007----9----9999999999997259989999


Q ss_pred             EEE-EECCCHHHHHHHHHHHHHHHCCCEEEEECC
Q ss_conf             423-204713588899999999854968998178
Q gi|254781047|r  146 DEF-MITNIADAIILSRLFAALFSHGCIIVMTSN  178 (404)
Q Consensus       146 DEF-~V~DiaDAmil~rl~~~lf~~gv~lV~TSN  178 (404)
T Consensus        95 DEPt~~LD~~~~~~i~~~l~~~--~~tii~vsHd  126 (144)
T cd03221          95 DEPTNHLDLESIEALEEALKEY--PGTVILVSHD  126 (144)
T ss_pred             ECCCCCCCHHHHHHHHHHHHHC--CCEEEEEECC
T ss_conf             5775558999999999999970--9999999679