HHsearch alignment for GI: 254781047 and conserved domain: cd03254
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=95.23 E-value=0.11 Score=30.76 Aligned_cols=27 Identities=26% Similarity=0.454 Sum_probs=22.2
Q ss_pred CCEEEEECCCCCCHHHHHHHHHHHCCC
Q ss_conf 864998888877289999999985781
Q gi|254781047|r 66 MQGIYLHGDVGQGKSMLMNLFFALVPI 92 (404)
Q Consensus 66 ~kGlYL~G~VG~GKT~LMdlFy~~l~~ 92 (404)
T Consensus 29 Ge~vaivG~sGsGKSTLl~ll~gl~~p 55 (229)
T cd03254 29 GETVAIVGPTGAGKTTLINLLMRFYDP 55 (229)
T ss_pred CCEEEEECCCCCHHHHHHHHHHCCCCC
T ss_conf 999999999998099999999668667