HHsearch alignment for GI: 254781047 and conserved domain: cd03288
>cd03288 ABCC_SUR2 The SUR domain 2. The sulfonylurea receptor SUR is an ATP binding cassette (ABC) protein of the ABCC/MRP family. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=94.31 E-value=0.26 Score=28.35 Aligned_cols=27 Identities=41% Similarity=0.540 Sum_probs=22.8
Q ss_pred CCEEEEECCCCCCHHHHHHHHHHHCCC
Q ss_conf 864998888877289999999985781
Q gi|254781047|r 66 MQGIYLHGDVGQGKSMLMNLFFALVPI 92 (404)
Q Consensus 66 ~kGlYL~G~VG~GKT~LMdlFy~~l~~ 92 (404)
T Consensus 47 Ge~vaIvG~sGsGKSTL~~ll~gl~~p 73 (257)
T cd03288 47 GQKVGICGRTGSGKSSLSLAFFRMVDI 73 (257)
T ss_pred CCEEEEECCCCCCHHHHHHHHHHCCCC
T ss_conf 999999999998199999999605667