HHsearch alignment for GI: 254781047 and conserved domain: pfam00308
>pfam00308 Bac_DnaA Bacterial dnaA protein.
Probab=98.96 E-value=4.6e-09 Score=77.57 Aligned_cols=104 Identities=23% Similarity=0.300 Sum_probs=68.7
Q ss_pred CEEEEECCCCCCHHHHHHHHHHHCCCC-HHHH---HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCE
Q ss_conf 649988888772899999999857811-1468---889999999999999971311224665578078999999613879
Q gi|254781047|r 67 QGIYLHGDVGQGKSMLMNLFFALVPIE-KKCR---LHFYEFMKDVHSRIIMYRKKIEFGEILESDPIPLVASSIALESRV 142 (404)
Q Consensus 67 kGlYL~G~VG~GKT~LMdlFy~~l~~~-~K~R---~HFh~FM~~ih~~l~~~~~~~~~~~~~~~dpl~~va~~l~~~~~l 142 (404)
T Consensus 35 npl~i~G~~G~GKTHLLqA~~~~~~~~~~~~~v~yl~~~~~~~~~~~~l---~~----------~~~~~f~~-~l~~~d~ 100 (219)
T pfam00308 35 NPLFIYGGVGLGKTHLLHAIGNYALRNFPNLRVVYLTSEEFLNDFVDAL---RD----------NKIEAFKK-SYRNVDL 100 (219)
T ss_pred CCEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHH---HC----------CCHHHHHH-HHHHCCH
T ss_conf 8269988999988899999999999849998288843999999889999---81----------88889999-9763233
Q ss_pred EEEEEEEEC--CCHHHHHHHHHHHHHHHCCCEEEEECCCCHHHH
Q ss_conf 998423204--713588899999999854968998178686775
Q gi|254781047|r 143 LCFDEFMIT--NIADAIILSRLFAALFSHGCIIVMTSNFIPENL 184 (404)
Q Consensus 143 LCfDEF~V~--DiaDAmil~rl~~~lf~~gv~lV~TSN~~P~dL 184 (404)
T Consensus 101 l~iDDi~~l~~~~~~ee~lf~l~N~~~~~~~~lllts~~~p~~l 144 (219)
T pfam00308 101 LLIDDIQFLAGKEKTQEEFFHTFNALHENNKQIVLTSDRPPKEL 144 (219)
T ss_pred HHHCCHHHHCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCC
T ss_conf 65223676568647899999999999972986999779981002