HHsearch alignment for GI: 254781047 and conserved domain: pfam03969
>pfam03969 AFG1_ATPase AFG1-like ATPase. This family of proteins contains a P-loop motif and are predicted to be ATPases.
Probab=100.00 E-value=0 Score=914.42 Aligned_cols=358 Identities=36% Similarity=0.621 Sum_probs=337.7
Q ss_pred HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC-CCCHHHHHHHCCCCCCCCCCCCEEEEECCCCCCHHHHH
Q ss_conf 58999999997488778989999999999999998613543-33225664310246666668864998888877289999
Q gi|254781047|r 5 LVSSRLISLIQDKKLKYNPAQESVVKSFDRLLVDLYKQQKQ-EQGIFSWLWNLRGIKRKYCSMQGIYLHGDVGQGKSMLM 83 (404)
Q Consensus 5 ~~~~~y~~~v~~~~i~~D~~Q~~~i~~L~~L~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~kGlYL~G~VG~GKT~LM 83 (404)
T Consensus 2 tP~~~Y~~~v~~g~l~~D~~Q~~a~~~L~~L~~~l~~~~~~~~~~~~~~~~~~---~~~~~~~kGlYl~G~VGrGKTmLM 78 (361)
T pfam03969 2 TPPQRYTAQLQRGAIFPDVAQANAVPALDRLYQRLQAADFVRQSGAGGKLWGR---KRSHQPVRGLYLWGGVGRGKTHLM 78 (361)
T ss_pred CHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCC---CCCCCCCCEEEEECCCCCCHHHHH
T ss_conf 87999999986799999989999999999999999715565555234443157---887999986898899888699999
Q ss_pred HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEEEECCCHHHHHHHHHH
Q ss_conf 99998578111468889999999999999971311224665578078999999613879998423204713588899999
Q gi|254781047|r 84 NLFFALVPIEKKCRLHFYEFMKDVHSRIIMYRKKIEFGEILESDPIPLVASSIALESRVLCFDEFMITNIADAIILSRLF 163 (404)
Q Consensus 84 dlFy~~l~~~~K~R~HFh~FM~~ih~~l~~~~~~~~~~~~~~~dpl~~va~~l~~~~~lLCfDEF~V~DiaDAmil~rl~ 163 (404)
T Consensus 79 DlFy~~lp~~~K~R~HFh~FM~~vH~~l~~~~~--------~~dpl~~va~~l~~~~~lLCfDEFqV~DIaDAMIL~rLf 150 (361)
T pfam03969 79 DSFFESLPGERKRRTHFHRFMFRVHDELTTLQG--------GDDPLPIAADRFANEARLLCFDEFEVDDIGDAMILGRLF 150 (361)
T ss_pred HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHC--------CCCCHHHHHHHHHHCCCEEEEEEEEECCHHHHHHHHHHH
T ss_conf 999986775344456678999999999999766--------776389999999725877997635616788899999999
Q ss_pred HHHHHCCCEEEEECCCCHHHHHCCCCCHHHHHHHHHHHHHCCEEEECCCCCHHHHCCCCCCCEEEECCCHHHHHHHHHHH
Q ss_conf 99985496899817868677523874056689899999850508980473112211236783022035302268999999
Q gi|254781047|r 164 AALFSHGCIIVMTSNFIPENLYKDEINRNVLVSFIELLEKKLEIISLDSGQDYRRKEQSILPIYMTPLNSYNRVLMDKLW 243 (404)
Q Consensus 164 ~~lf~~gv~lV~TSN~~P~dLY~~GLqR~~FlPfI~~lk~~~~V~~l~~~~DYR~~~~~~~~~y~~p~~~~~~~~l~~~f 243 (404)
T Consensus 151 ~~Lf~~gvvlV~TSN~~P~~LY~~GLqR~~FlPfI~ll~~~~~v~~l~~~~DYR~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (361)
T pfam03969 151 EALFARGVSLVATSNTAPEQLYRNGLNRQRFLPAIDLLESHFEVVRVDGPVDYRLRTLEQAPLWLYPLDGAAWAALDRLW 230 (361)
T ss_pred HHHHHCCCEEEEECCCCHHHHHCCCCCHHHHHHHHHHHHHHCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 99997797899808999899836874177889999999986789981598780546565565400578666689999999
Q ss_pred HHHCCCCCCCCCCEEEECCEEEEECCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHCCEEEECCCCCCCCCCHHHHHHHHH
Q ss_conf 98604444677632763680899612202111101999852102468999998537889981898787246389998999
Q gi|254781047|r 244 AHITKGKKSLSLNISTEGGYEIHVPFFCSRVSRFSFFDLCDRPLSANDFVEIANRFDVVIINDIPLLKEDRKDWIKRFIM 323 (404)
Q Consensus 244 ~~l~~~~~~~~~~i~v~~gR~i~v~~~~~~va~f~F~eLC~~~lg~~DYi~Ia~~f~ti~I~~VP~l~~~~~d~arRFI~ 323 (404)
T Consensus 231 ~~l~~~~~~~~~~l~v-~gR~i~v~~~~~~v~~f~F~~LC~~p~~~~DYl~ia~~f~~v~i~~VP~l~~~~~d~arRFI~ 309 (361)
T pfam03969 231 DALTLGEPQPLSTLEV-AARLARARAAGGDLVWFSFADLCLAPRHPSDYLALAERFSTVFLTDVPPMTRCSQDEARRFIA 309 (361)
T ss_pred HHHHCCCCCCCCCEEE-CCEEEEEHHHCCCEECCCHHHHHHCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCHHHHHHHH
T ss_conf 9970899899751104-463775021038850012888866558889999999869999988998899987089999999
Q ss_pred HHHHHHCCCCCEEEECCCCHHHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHH
Q ss_conf 99998228982899807897880134676531348998988745242788972
Q gi|254781047|r 324 LIDVFYEHKIGLIISSEENIEDLFPYKLRKGAFEIQRTVSRLYEMFSAQYIGK 376 (404)
Q Consensus 324 LID~lYd~kv~Li~sa~~~~~~L~~~~~~~~~F~f~Rt~SRL~EMqS~~yl~~ 376 (404)
T Consensus 310 LID~lYd~~~kL~~sa~~~~~~L--y~g~~~~f~f~Rt~SRL~EM~s~~yl~r 360 (361)
T pfam03969 310 LVDELYDRHVKLVASAEAALDDL--YRGGRLAFEFQRTLSRLLEMQSEDYLAR 360 (361)
T ss_pred HHHHHHCCCCCEEEECCCCHHHH--CCCCCCHHHHHHHHHHHHHHCCHHHHHC
T ss_conf 99998407997899878999996--4898420110498799999687877626