HHsearch alignment for GI: 254781047 and conserved domain: smart00382
>smart00382 AAA ATPases associated with a variety of cellular activities. AAA - ATPases associated with a variety of cellular activities. This profile/alignment only detects a fraction of this vast family. The poorly conserved N-terminal helix is missing from the alignment.
Probab=97.57 E-value=0.00025 Score=47.57 Aligned_cols=113 Identities=15% Similarity=0.011 Sum_probs=58.1
Q ss_pred CCEEEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH--HCCCCCCCCCCCCHHHHHHHHHHCCC--C
Q ss_conf 8649988888772899999999857811146888999999999999997--13112246655780789999996138--7
Q gi|254781047|r 66 MQGIYLHGDVGQGKSMLMNLFFALVPIEKKCRLHFYEFMKDVHSRIIMY--RKKIEFGEILESDPIPLVASSIALES--R 141 (404)
Q Consensus 66 ~kGlYL~G~VG~GKT~LMdlFy~~l~~~~K~R~HFh~FM~~ih~~l~~~--~~~~~~~~~~~~dpl~~va~~l~~~~--~ 141 (404)
T Consensus 2 ~~~ill~G~~GsGKTtl~~~la~~~~~~~-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (148)
T smart00382 2 GEVILIVGPPGSGKTTLARALARELGPPG-GGVIYIDGEDILEEVLDQLLLIIVGGKKASGSGELRLRLALALARKLKPD 80 (148)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHHHCCCC-CCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCC
T ss_conf 97899999997029999999998726689-96899875998988898765300011221051999999999999844998
Q ss_pred EEEEEEEEECCCHHHHHHHHH-------HHHHHHCCCEEEEECCC
Q ss_conf 999842320471358889999-------99998549689981786
Q gi|254781047|r 142 VLCFDEFMITNIADAIILSRL-------FAALFSHGCIIVMTSNF 179 (404)
Q Consensus 142 lLCfDEF~V~DiaDAmil~rl-------~~~lf~~gv~lV~TSN~ 179 (404)
T Consensus 81 viiiDei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~n~ 125 (148)
T smart00382 81 VLILDEITSLLDAEQEALLLLLEELRLLLLLKSEKNLTVILTTND 125 (148)
T ss_pred EEEEECCHHHCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEECC
T ss_conf 999827502147620799999999998517657899899995699