HHsearch alignment for GI: 254781048 and conserved domain: COG0169
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism].
Probab=96.67 E-value=0.041 Score=33.83 Aligned_cols=129 Identities=13% Similarity=0.156 Sum_probs=74.8
Q ss_pred CCEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCEEEECCCHHHHCCCCEEEEECCCC
Q ss_conf 87289988981368999999957998699996578812898830762054468875685269748837897899955666
Q gi|254781048|r 3 SNKIALIGSGMIGGTLAHLAVLKKLGDVVLLDIVDGMPRGKALDIAESSPVEGFGAQLCGTSDYSDIAEADVCIVTAGIP 82 (320)
Q Consensus 3 ~~KV~IIGaG~VG~~~a~~~~~~~l~ei~L~D~~~~~~~g~~~Dl~~~~~~~~~~~~v~~~~d~~~l~~aDivVitag~~ 82 (320)
T Consensus 126 ~~~vlilGAGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~----~~~~~~~~~~~~~~~~dliINaTp~G 201 (283)
T COG0169 126 GKRVLILGAGGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGA----AVEAAALADLEGLEEADLLINATPVG 201 (283)
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHCC----CCCCCCCCCCCCCCCCCEEEECCCCC
T ss_conf 88899989768999999999986998799995888999999998645056----31102455412355457899788787
Q ss_pred CCCC--CCHHHHHHHHHHHHHHHHHHHHHCCCCC-CEEEECCCCHHHHHHHHHHCCCCHHHHHHHCCCHHHHH
Q ss_conf 6765--5746789988999999997654126674-08871484207899998844998656110005256899
Q gi|254781048|r 83 RKPS--MSRDDLLADNLKAIEKVGAGIRKYAPNS-FVICITNPLDAMVWALQKFSGLPSHMVVGMAGILDSAR 152 (320)
Q Consensus 83 ~~~g--~~R~dll~~N~~i~~~i~~~i~~~~p~~-i~ivvtNPvDv~~~~~~~~sg~~~~rViG~Gt~LDs~R 152 (320)
T Consensus 202 m~~~~~~~~~~-----~~~----------l~~~~~v~D~vY~P~~TplL~~A~~~G~~--~idGl~Mlv~Qaa 257 (283)
T COG0169 202 MAGPEGDSPVP-----AEL----------LPKGAIVYDVVYNPLETPLLREARAQGAK--TIDGLGMLVHQAA 257 (283)
T ss_pred CCCCCCCCCCC-----HHH----------CCCCCEEEEECCCCCCCHHHHHHHHCCCC--EECCHHHHHHHHH
T ss_conf 77887888886-----776----------68677899811188788899999985990--7873999999999