HHsearch alignment for GI: 254781048 and conserved domain: COG0169

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism].
Probab=96.67  E-value=0.041  Score=33.83  Aligned_cols=129  Identities=13%  Similarity=0.156  Sum_probs=74.8

Q ss_pred             CCEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCEEEECCCHHHHCCCCEEEEECCCC
Q ss_conf             87289988981368999999957998699996578812898830762054468875685269748837897899955666
Q gi|254781048|r    3 SNKIALIGSGMIGGTLAHLAVLKKLGDVVLLDIVDGMPRGKALDIAESSPVEGFGAQLCGTSDYSDIAEADVCIVTAGIP   82 (320)
Q Consensus         3 ~~KV~IIGaG~VG~~~a~~~~~~~l~ei~L~D~~~~~~~g~~~Dl~~~~~~~~~~~~v~~~~d~~~l~~aDivVitag~~   82 (320)
T Consensus       126 ~~~vlilGAGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~----~~~~~~~~~~~~~~~~dliINaTp~G  201 (283)
T COG0169         126 GKRVLILGAGGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGA----AVEAAALADLEGLEEADLLINATPVG  201 (283)
T ss_pred             CCEEEEECCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHCC----CCCCCCCCCCCCCCCCCEEEECCCCC
T ss_conf             88899989768999999999986998799995888999999998645056----31102455412355457899788787


Q ss_pred             CCCC--CCHHHHHHHHHHHHHHHHHHHHHCCCCC-CEEEECCCCHHHHHHHHHHCCCCHHHHHHHCCCHHHHH
Q ss_conf             6765--5746789988999999997654126674-08871484207899998844998656110005256899
Q gi|254781048|r   83 RKPS--MSRDDLLADNLKAIEKVGAGIRKYAPNS-FVICITNPLDAMVWALQKFSGLPSHMVVGMAGILDSAR  152 (320)
Q Consensus        83 ~~~g--~~R~dll~~N~~i~~~i~~~i~~~~p~~-i~ivvtNPvDv~~~~~~~~sg~~~~rViG~Gt~LDs~R  152 (320)
T Consensus       202 m~~~~~~~~~~-----~~~----------l~~~~~v~D~vY~P~~TplL~~A~~~G~~--~idGl~Mlv~Qaa  257 (283)
T COG0169         202 MAGPEGDSPVP-----AEL----------LPKGAIVYDVVYNPLETPLLREARAQGAK--TIDGLGMLVHQAA  257 (283)
T ss_pred             CCCCCCCCCCC-----HHH----------CCCCCEEEEECCCCCCCHHHHHHHHCCCC--EECCHHHHHHHHH
T ss_conf             77887888886-----776----------68677899811188788899999985990--7873999999999