HHsearch alignment for GI: 254781048 and conserved domain: COG1160
>COG1160 Predicted GTPases [General function prediction only].
Probab=90.33 E-value=1.5 Score=23.65 Aligned_cols=136 Identities=18% Similarity=0.301 Sum_probs=71.8
Q ss_pred CCCCEEEEECCCCHH-HHHHHHHHHCCCCEEEEEEC----CCCCHHHHHH--H----HHHHCCCCCCC----CEEEECCC
Q ss_conf 998728998898136-89999999579986999965----7881289883--0----76205446887----56852697
Q gi|254781048|r 1 MKSNKIALIGSGMIG-GTLAHLAVLKKLGDVVLLDI----VDGMPRGKAL--D----IAESSPVEGFG----AQLCGTSD 65 (320)
Q Consensus 1 mk~~KV~IIGaG~VG-~~~a~~~~~~~l~ei~L~D~----~~~~~~g~~~--D----l~~~~~~~~~~----~~v~~~~d 65 (320)
T Consensus 1 m~~~~VAIVGRPNVGKSTLFNRL~g~r~---AIV~D~pGvTRDr~y~~~~~~~~~f~lIDTgGl~~~~~~~l~~~i~~Qa 77 (444)
T COG1160 1 MSTPVVAIVGRPNVGKSTLFNRLTGRRI---AIVSDTPGVTRDRIYGDAEWLGREFILIDTGGLDDGDEDELQELIREQA 77 (444)
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHCCEE---EEEECCCCCCCCCCCCEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHH
T ss_conf 9977899989998758999988757702---6760699975577545069838607999789977688128999999999
Q ss_pred HHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHH-----HHHHHHHCCCC---
Q ss_conf 4883789789995566667655746789988999999997654126674088714842078-----99998844998---
Q gi|254781048|r 66 YSDIAEADVCIVTAGIPRKPSMSRDDLLADNLKAIEKVGAGIRKYAPNSFVICITNPLDAM-----VWALQKFSGLP--- 137 (320)
Q Consensus 66 ~~~l~~aDivVitag~~~~~g~~R~dll~~N~~i~~~i~~~i~~~~p~~i~ivvtNPvDv~-----~~~~~~~sg~~--- 137 (320)
T Consensus 78 ~~Ai~eADvilfvVD~--~~Git~~D---------~~ia~~Lr~~--~kpviLvvNK~D~~~~e~~~~efysl-G~g~~~ 143 (444)
T COG1160 78 LIAIEEADVILFVVDG--REGITPAD---------EEIAKILRRS--KKPVILVVNKIDNLKAEELAYEFYSL-GFGEPV 143 (444)
T ss_pred HHHHHHCCEEEEEEEC--CCCCCHHH---------HHHHHHHHHC--CCCEEEEEECCCCCHHHHHHHHHHHC-CCCCCE
T ss_conf 9999767999999848--87899789---------9999999853--99889999766673045648999864-789826
Q ss_pred ---HHHHHHHCCCHHHHHH
Q ss_conf ---6561100052568999
Q gi|254781048|r 138 ---SHMVVGMAGILDSARF 153 (320)
Q Consensus 138 ---~~rViG~Gt~LDs~R~ 153 (320)
T Consensus 144 ~ISA~Hg~Gi~dLld~v~~ 162 (444)
T COG1160 144 PISAEHGRGIGDLLDAVLE 162 (444)
T ss_pred EEEHHHCCCHHHHHHHHHH
T ss_conf 8425535698999999997