HHsearch alignment for GI: 254781048 and conserved domain: COG1893

Probab=97.83  E-value=8.6e-05  Score=51.19  Aligned_cols=118  Identities=28%  Similarity=0.384  Sum_probs=72.9

Q ss_pred             CEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCC--CCHHHHHHHHHHHCCCCCCCCEEEECCCHHHHCCCCEEEEECCC
Q ss_conf             7289988981368999999957998699996578--81289883076205446887568526974883789789995566
Q gi|254781048|r    4 NKIALIGSGMIGGTLAHLAVLKKLGDVVLLDIVD--GMPRGKALDIAESSPVEGFGAQLCGTSDYSDIAEADVCIVTAGI   81 (320)
Q Consensus         4 ~KV~IIGaG~VG~~~a~~~~~~~l~ei~L~D~~~--~~~~g~~~Dl~~~~~~~~~~~~v~~~~d~~~l~~aDivVitag~   81 (320)
T Consensus         1 mkI~IlGaGAvG~l~g~~L~~~g-~~V~~~~R~~~~~~l~~~GL~i~~~~~--~~~~~~~~~~~~~~~~~~Dlviv~vKa   77 (307)
T COG1893           1 MKILILGAGAIGSLLGARLAKAG-HDVTLLVRSRRLEALKKKGLRIEDEGG--NFTTPVVAATDAEALGPADLVIVTVKA   77 (307)
T ss_pred             CEEEEECCCHHHHHHHHHHHHCC-CCEEEEECHHHHHHHHHCCEEEEECCC--CCCCCCCCCCCCCCCCCCCEEEEEECC
T ss_conf             95999878789999999998589-957998108999999878979981688--522443235673336788889998042


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHHHCC-CCCCEEEECCCCHHHHHHHHHHCCCCHHHHHH
Q ss_conf             667655746789988999999997654126-67408871484207899998844998656110
Q gi|254781048|r   82 PRKPSMSRDDLLADNLKAIEKVGAGIRKYA-PNSFVICITNPLDAMVWALQKFSGLPSHMVVG  143 (320)
Q Consensus        82 ~~~~g~~R~dll~~N~~i~~~i~~~i~~~~-p~~i~ivvtNPvDv~~~~~~~~sg~~~~rViG  143 (320)
T Consensus        78 ~q~----------------~~al~~l~~~~~~~t~vl~lqNG~g~~e-~l~~~--~~~~~il~  121 (307)
T COG1893          78 YQL----------------EEALPSLAPLLGPNTVVLFLQNGLGHEE-ELRKI--LPKETVLG  121 (307)
T ss_pred             CCH----------------HHHHHHHHHHCCCCCEEEEEECCCCHHH-HHHHH--CCCCEEEE
T ss_conf             238----------------9999998730799848999708972699-99873--88342898