HHsearch alignment for GI: 254781048 and conserved domain: PRK00258
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed.
Probab=97.26 E-value=0.0079 Score=38.46 Aligned_cols=131 Identities=21% Similarity=0.226 Sum_probs=76.3
Q ss_pred CCCEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCEEEECCCH-HHHCCCCEEEEECC
Q ss_conf 98728998898136899999995799869999657881289883076205446887568526974-88378978999556
Q gi|254781048|r 2 KSNKIALIGSGMIGGTLAHLAVLKKLGDVVLLDIVDGMPRGKALDIAESSPVEGFGAQLCGTSDY-SDIAEADVCIVTAG 80 (320)
Q Consensus 2 k~~KV~IIGaG~VG~~~a~~~~~~~l~ei~L~D~~~~~~~g~~~Dl~~~~~~~~~~~~v~~~~d~-~~l~~aDivVitag 80 (320)
T Consensus 121 ~~k~vlIlGaGGaarai~~al~~~g~~~i~i~nR~~~~a~~l~~~~~~~-------~~~~~~~~~~~~~~~~diiInaTp 193 (275)
T PRK00258 121 KGKRILLLGAGGAARAVILPLLELGVAEITIVNRTVERAEELAELFGEG-------VQALGLDELAGELADFDLIINTTS 193 (275)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHCCC-------CCEEEHHHHHHCCCCCCEEEECCC
T ss_conf 6875999888710799999999769998999958999999999983567-------627537875430445777996577
Q ss_pred CCCCCCCC-HHHHHHHHHHHHHHHHHHHHHCCCCCC-EEEECCCCHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHH
Q ss_conf 66676557-467899889999999976541266740-887148420789999884499865611000525689999999
Q gi|254781048|r 81 IPRKPSMS-RDDLLADNLKAIEKVGAGIRKYAPNSF-VICITNPLDAMVWALQKFSGLPSHMVVGMAGILDSARFRYFL 157 (320)
Q Consensus 81 ~~~~~g~~-R~dll~~N~~i~~~i~~~i~~~~p~~i-~ivvtNPvDv~~~~~~~~sg~~~~rViG~Gt~LDs~R~~~~i 157 (320)
T Consensus 194 ~----Gm~~~~~~~~------------~~~~~~~~~v~D~~Y~P~~T~ll~~a~~~G~~--~i~Gl~Mli~Qa~~qf~i 254 (275)
T PRK00258 194 A----GMSGELPPLP------------ASLLRPGTVVYDMIYGPLPTPFLAWAKAQGAR--TVDGLGMLVHQAAEAFEL 254 (275)
T ss_pred C----CCCCCCCHHH------------HHHCCCCCEEEEEEECCCCCHHHHHHHHCCCE--EECCHHHHHHHHHHHHHH
T ss_conf 7----7778865113------------87648886699866579999999999988294--857799999999999999