HHsearch alignment for GI: 254781048 and conserved domain: PRK01438

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional.
Probab=96.29  E-value=0.045  Score=33.55  Aligned_cols=128  Identities=14%  Similarity=0.104  Sum_probs=69.8

Q ss_pred             CCCEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCCH-HHHHHHHHHHCCCCCCCCEEEECCCHHH-HCCCCEEEEEC
Q ss_conf             987289988981368999999957998699996578812-8988307620544688756852697488-37897899955
Q gi|254781048|r    2 KSNKIALIGSGMIGGTLAHLAVLKKLGDVVLLDIVDGMP-RGKALDIAESSPVEGFGAQLCGTSDYSD-IAEADVCIVTA   79 (320)
Q Consensus         2 k~~KV~IIGaG~VG~~~a~~~~~~~l~ei~L~D~~~~~~-~g~~~Dl~~~~~~~~~~~~v~~~~d~~~-l~~aDivVita   79 (320)
T Consensus        13 ~gk~v~V~GlG~sG~s~a~~L~~~G-~~v~~~D~~~~~~~~~~~~~l~~~------g~~~~~g~~~~~~~~~~d~vV~SP   85 (481)
T PRK01438         13 SGLRVVVAGLGVSGFPAADALHELG-ASVTVVADGDDDRSRERAALLEVL------GATVRLGDGETTLPEGTELVVTSP   85 (481)
T ss_pred             CCCEEEEEEECHHHHHHHHHHHHCC-CEEEEEECCCCCCCHHHHHHHHHC------CCEEEECCCHHHHHCCCCEEEECC
T ss_conf             8998999957588999999999679-989999799874486899988854------988996887566624899999899


Q ss_pred             CCCCCCCCCHHH-HHHHHHHHHHHHH--HHHHHC-CCCCCEEEE--CCCCHH---HHHHHHHHCCCCH
Q ss_conf             666676557467-8998899999999--765412-667408871--484207---8999988449986
Q gi|254781048|r   80 GIPRKPSMSRDD-LLADNLKAIEKVG--AGIRKY-APNSFVICI--TNPLDA---MVWALQKFSGLPS  138 (320)
Q Consensus        80 g~~~~~g~~R~d-ll~~N~~i~~~i~--~~i~~~-~p~~i~ivv--tNPvDv---~~~~~~~~sg~~~  138 (320)
T Consensus        86 GI~~~~--p~~~~a~~~gi~i~~eiel~~~~~~~~~~~~~~IaVTGTnGKTTTtsli~~iL~~~g~~~  151 (481)
T PRK01438         86 GWRPTH--PLLAAAAEAGIPVWGDVELAWRLRDPDGTPAPWLAVTGTNGKTTTVQMLASILRAAGLRA  151 (481)
T ss_pred             CCCCCC--HHHHHHHHCCCCEECHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCE
T ss_conf             789989--999999986993861899999875213688878999389974609999999999669970