HHsearch alignment for GI: 254781048 and conserved domain: PRK04690

>PRK04690 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional.
Probab=96.29  E-value=0.028  Score=34.90  Aligned_cols=97  Identities=13%  Similarity=0.065  Sum_probs=56.1

Q ss_pred             CCCCEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCEEEECCCHHHHCCCCEEEEECC
Q ss_conf             99872899889813689999999579986999965788128988307620544688756852697488378978999556
Q gi|254781048|r    1 MKSNKIALIGSGMIGGTLAHLAVLKKLGDVVLLDIVDGMPRGKALDIAESSPVEGFGAQLCGTSDYSDIAEADVCIVTAG   80 (320)
Q Consensus         1 mk~~KV~IIGaG~VG~~~a~~~~~~~l~ei~L~D~~~~~~~g~~~Dl~~~~~~~~~~~~v~~~~d~~~l~~aDivVitag   80 (320)
T Consensus         6 ~~gkkv~V~GlG~sG~aaa~~L~~~g~~~~v~~~~~~~~~~~-~~~~~~------~~~~~~~~~~~~~l~~~d~vv~SPG   78 (468)
T PRK04690          6 LEGKRVALWGWGREGRAAYRALRAQLPAQPLTVFCNAEEVRE-VGALAD------AALLVETEASAQRLAAFEVVVKSPG   78 (468)
T ss_pred             CCCCEEEEEEECHHHHHHHHHHHHCCCEEEEEECCCCCCCHH-HHHHCC------CCCEEECCCCHHHHHCCCEEEECCC
T ss_conf             397979998347879999999996699049997288324646-676204------5756746778557614889998995


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             6667655746789988999999997
Q gi|254781048|r   81 IPRKPSMSRDDLLADNLKAIEKVGA  105 (320)
Q Consensus        81 ~~~~~g~~R~dll~~N~~i~~~i~~  105 (320)
T Consensus        79 i~~~~p-~~~~a~~~~i~i~~eiel  102 (468)
T PRK04690         79 ISPYRP-EALAAAAQGTPFIGGTAL  102 (468)
T ss_pred             CCCCCH-HHHHHHHCCCCEEEHHHH
T ss_conf             798689-999999879948868999