HHsearch alignment for GI: 254781048 and conserved domain: PRK12550
>PRK12550 shikimate 5-dehydrogenase; Reviewed.
Probab=95.98 E-value=0.11 Score=30.99 Aligned_cols=128 Identities=16% Similarity=0.153 Sum_probs=67.9
Q ss_pred CCEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCEEEECCCHHHHCCCCEEEEEC--C
Q ss_conf 87289988981368999999957998699996578812898830762054468875685269748837897899955--6
Q gi|254781048|r 3 SNKIALIGSGMIGGTLAHLAVLKKLGDVVLLDIVDGMPRGKALDIAESSPVEGFGAQLCGTSDYSDIAEADVCIVTA--G 80 (320)
Q Consensus 3 ~~KV~IIGaG~VG~~~a~~~~~~~l~ei~L~D~~~~~~~g~~~Dl~~~~~~~~~~~~v~~~~d~~~l~~aDivVita--g 80 (320)
T Consensus 122 ~~~~lilGaGGaarai~~aL~~~G~~~i~I~nR~~~~a~~L~~~~~~-----~~------~~~-~~~~~~dliINaTpvG 189 (272)
T PRK12550 122 DAVVALRGSGGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELYGY-----EW------RPD-LGGIEADLLVNVTPIG 189 (272)
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHCCC-----CC------CCC-CCCCCCCEEEECCCCC
T ss_conf 77389973623389999999976998799998998999999987397-----33------464-3346689799667665
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC-CCEEEECCCCHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHH
Q ss_conf 666765574678998899999999765412667-40887148420789999884499865611000525689999999
Q gi|254781048|r 81 IPRKPSMSRDDLLADNLKAIEKVGAGIRKYAPN-SFVICITNPLDAMVWALQKFSGLPSHMVVGMAGILDSARFRYFL 157 (320)
Q Consensus 81 ~~~~~g~~R~dll~~N~~i~~~i~~~i~~~~p~-~i~ivvtNPvDv~~~~~~~~sg~~~~rViG~Gt~LDs~R~~~~i 157 (320)
T Consensus 190 m~~~~~~~~~~~~~----------~---~l~~~~~v~D~vY~P~~T~ll~~A~~~G~--~~i~Gl~MLi~Qa~~qF~l 252 (272)
T PRK12550 190 MAGGPEADKLAFSE----------A---EIDAASVVFDVVALPAETPLIRYARARGK--TVITGAEVIALQAVEQFVL 252 (272)
T ss_pred CCCCCCCCCCCCCH----------H---HCCCCCEEEEEECCCCCCHHHHHHHHCCC--CEECCHHHHHHHHHHHHHH
T ss_conf 57897534588997----------8---85888789997438987899999998849--3627699999999999999