HHsearch alignment for GI: 254781048 and conserved domain: PRK12939

Probab=90.77  E-value=1.4  Score=23.89  Aligned_cols=115  Identities=17%  Similarity=0.237  Sum_probs=66.7

Q ss_pred             CEEEEE-CC-CCHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCC-CCCCCCEEEECCCH--------HHHCCC
Q ss_conf             728998-89-81368999999957998699996578812898830762054-46887568526974--------883789
Q gi|254781048|r    4 NKIALI-GS-GMIGGTLAHLAVLKKLGDVVLLDIVDGMPRGKALDIAESSP-VEGFGAQLCGTSDY--------SDIAEA   72 (320)
Q Consensus         4 ~KV~II-Ga-G~VG~~~a~~~~~~~l~ei~L~D~~~~~~~g~~~Dl~~~~~-~~~~~~~v~~~~d~--------~~l~~a   72 (320)
T Consensus         7 ~KvalVTGgs~GIG~aia~~la~~Ga-~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i   85 (250)
T PRK12939          7 GKRALVTGAARGLGAAFAEALAEAGA-TVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGGL   85 (250)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCC
T ss_conf             98799958366899999999998799-99999698899999999999559909999924899999999999999974999


Q ss_pred             CEEEEECCCCC-CCC--CCHH---HHHHHHHH----HHHHHHHHHHHCCCCCCEEEEC
Q ss_conf             78999556666-765--5746---78998899----9999997654126674088714
Q gi|254781048|r   73 DVCIVTAGIPR-KPS--MSRD---DLLADNLK----AIEKVGAGIRKYAPNSFVICIT  120 (320)
Q Consensus        73 DivVitag~~~-~~g--~~R~---dll~~N~~----i~~~i~~~i~~~~p~~i~ivvt  120 (320)
T Consensus        86 DiLVNNAG~~~~~~~~~~~~e~~~~~~~iNl~~~~~~~k~~~~~m~~~~-~G~IInis  142 (250)
T PRK12939         86 DGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMSRAALPHLRDSG-RGRIVNLA  142 (250)
T ss_pred             CEEEECCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCEEEEEC
T ss_conf             7999887789999903499999999999982999999999999999849-93799980