HHsearch alignment for GI: 254781048 and conserved domain: PRK13940

Probab=96.88  E-value=0.0029  Score=41.30  Aligned_cols=100  Identities=16%  Similarity=0.128  Sum_probs=67.0

Q ss_pred             CCCEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCEEEECCC-HHHHCCCCEEEEECC
Q ss_conf             9872899889813689999999579986999965788128988307620544688756852697-488378978999556
Q gi|254781048|r    2 KSNKIALIGSGMIGGTLAHLAVLKKLGDVVLLDIVDGMPRGKALDIAESSPVEGFGAQLCGTSD-YSDIAEADVCIVTAG   80 (320)
Q Consensus         2 k~~KV~IIGaG~VG~~~a~~~~~~~l~ei~L~D~~~~~~~g~~~Dl~~~~~~~~~~~~v~~~~d-~~~l~~aDivVitag   80 (320)
T Consensus       180 ~~~~vlvvGaGem~~l~~k~L~~~g~~~i~v~nRt~~ra~~la~~~~~~--------~~~~~~~l~~~l~~aDivisaT~  251 (414)
T PRK13940        180 SSKNVLIIGAGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNA--------SAHYLSELPQLIKKADIIIAAVN  251 (414)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHCCC--------CCCCHHHHHHHHHHCCEEEEECC
T ss_conf             2283899668647899999999769987999457567799999970888--------50169999999863887998169


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHH
Q ss_conf             66676557467899889999999976541266740887148420789
Q gi|254781048|r   81 IPRKPSMSRDDLLADNLKAIEKVGAGIRKYAPNSFVICITNPLDAMV  127 (320)
Q Consensus        81 ~~~~~g~~R~dll~~N~~i~~~i~~~i~~~~p~~i~ivvtNPvDv~~  127 (320)
T Consensus       252 a~~-~ii~~~~~---------------~-~~p~-~~iDLavPRdidp  280 (414)
T PRK13940        252 VLE-YIVTCKYV---------------G-DKPR-VFIDISIPQALDP  280 (414)
T ss_pred             CCH-HHCCHHHH---------------C-CCCE-EEEEECCCCCCCH
T ss_conf             824-44048664---------------5-7975-8998458888884