HHsearch alignment for GI: 254781048 and conserved domain: TIGR01759
>TIGR01759 MalateDH-SF1 malate dehydrogenase; InterPro: IPR010945 Malate dehydrogenases catalyse the interconversion of malate and oxaloacetate using dinucleotide cofactors . The enzymes in this entry are found in archaea, bacteria and eukaryotes and fall into two distinct groups. The first group are cytoplamsic, NAD-dependent enzymes which participate in the citric acid cycle (1.1.1.37 from EC). The second group are found in plant chloroplasts, use NADP as cofactor, and participate in the C4 cycle (1.1.1.82 from EC). Structural studies indicate that these enzymes are homodimers with very sinmilar overall topology, though the chloroplast enzymes also have N- and C-terminal extensions, and all contain the classical Rossman fold for NAD(P)H binding , , , . Substrate specificity is determined by a mobile loop at the active site which uses charge balancing to discriminate between the correct substrates (malate and oxaloacetate) and other potential oxo/hydroxyacid substrates the enzyme may encounter within the cell .; GO: 0016615 malate dehydrogenase activity, 0006108 malate metabolic process.
Probab=100.00 E-value=0 Score=407.62 Aligned_cols=304 Identities=26% Similarity=0.386 Sum_probs=273.8
Q ss_pred CCCCEEEEECC-CCHHHHHHHHHHHCCC-C-----EEEEEECCC--CCHHHHHHHHHHHCCCCCCCCEEEECCC-HHHHC
Q ss_conf 99872899889-8136899999995799-8-----699996578--8128988307620544688756852697-48837
Q gi|254781048|r 1 MKSNKIALIGS-GMIGGTLAHLAVLKKL-G-----DVVLLDIVD--GMPRGKALDIAESSPVEGFGAQLCGTSD-YSDIA 70 (320)
Q Consensus 1 mk~~KV~IIGa-G~VG~~~a~~~~~~~l-~-----ei~L~D~~~--~~~~g~~~Dl~~~~~~~~~~~~v~~~~d-~~~l~ 70 (320)
T Consensus 1 ~~p~rV~VTGAAGQI~Y~Ll~~iA~G~~fG~Dqpv~L~LLdIP~A~~~LeGV~MEL~DCA--FPlL~~v~~T~~p~eAF~ 78 (329)
T TIGR01759 1 KKPVRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPQAMKALEGVVMELEDCA--FPLLAGVVATTDPEEAFK 78 (329)
T ss_pred CCCEEEEEECCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCC--CCCCCCCEECCCHHHHHC
T ss_conf 995379973744678999988985561048898468886077233113344355353064--522351122168687518
Q ss_pred CCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC-CCCCEEEECCCCHHHHHHHHHHC--CCCHHHHHHHCCC
Q ss_conf 89789995566667655746789988999999997654126-67408871484207899998844--9986561100052
Q gi|254781048|r 71 EADVCIVTAGIPRKPSMSRDDLLADNLKAIEKVGAGIRKYA-PNSFVICITNPLDAMVWALQKFS--GLPSHMVVGMAGI 147 (320)
Q Consensus 71 ~aDivVitag~~~~~g~~R~dll~~N~~i~~~i~~~i~~~~-p~~i~ivvtNPvDv~~~~~~~~s--g~~~~rViG~Gt~ 147 (320)
T Consensus 79 dvD~AlLvGa~PRK~GMER~DLL~~Ng~IF~~QG~aLn~~Ak~~vKVLVVGNPaNTNaLIa~~~AP~~ip~-~Nf~AmtR 157 (329)
T TIGR01759 79 DVDVALLVGAFPRKPGMERRDLLSKNGKIFKEQGKALNKVAKKDVKVLVVGNPANTNALIASKNAPKKIPP-KNFSAMTR 157 (329)
T ss_pred CCCEEEEECCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCCCCCC-CCCCHHHH
T ss_conf 98757761366895884479998722254687999999861898569985298627999999706865651-11102002
Q ss_pred HHHHHHHHHHHHHCCCCCCCC-EEEEECCCCCEEEEECCCCCCC----CCHHHHHHHCCCCCHHHHHHHHHHHHCCHHHH
Q ss_conf 568999999999719873355-0567507885246510235447----70155430015878767999984551015888
Q gi|254781048|r 148 LDSARFRYFLAQEFGVSVESV-TALVLGSHGDSMVPMLRYATVS----GIPVSDLVKLGWTTQEKIDQIVKRTREGGAEI 222 (320)
Q Consensus 148 LDs~R~~~~ia~~l~v~~~~V-~~~ViGeHGds~vp~~S~~~v~----g~p~~~~~~~~~~~~~~~~~l~~~v~~~g~~i 222 (320)
T Consensus 158 LDhNRA~~qlA~K~Gv~~~~V~nv~iWGNHS~tQvPD~~~A~v~~~~~~~pV~e~i~d~~Wl~---g~F~~~Vq~RG~Av 234 (329)
T TIGR01759 158 LDHNRAKSQLAAKLGVPVSDVKNVIIWGNHSNTQVPDVTHATVDKDGKGKPVKELIKDDDWLE---GEFIPTVQQRGAAV 234 (329)
T ss_pred HHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCEEEEECCCCCEECCCCCCCCCCCC---CCCHHHHHHHHHHH
T ss_conf 247899999998758960113237997027876564453116874899341523346532100---43201032258999
Q ss_pred HHHHCCCCCCCCCHHHHHHHHHHHHCCC--CEEEEEEEEE-CC-CCCC-CCEEEEEEEEECCCCCEEEEC-CCCCHHHHH
Q ss_conf 8751576543220323234455452889--7499999997-36-4475-634788769997872288847-999889999
Q gi|254781048|r 223 VGLLRSGSAYYAPASSAIAIAESYLKNK--KNLLPCAAHL-SG-QYGV-EGFYVGVPVVIGHKGVEKIVE-LNLSFDEKD 296 (320)
Q Consensus 223 i~~~~kg~t~~~~a~a~~~ii~aIl~~~--~~v~~~s~~~-~g-~yg~-~~v~~s~P~vig~~Gi~~i~~-l~Ls~~E~~ 296 (320)
T Consensus 235 I~~RG~-SSAASAA~AA~dh~rdW~~GTpeG~~vSm~V~sp~GNpYGip~Gi~fSfPv~~~~~G~w~iV~Gl~~~df~r~ 313 (329)
T TIGR01759 235 IEARGA-SSAASAANAAIDHVRDWVLGTPEGDWVSMGVYSPDGNPYGIPEGIIFSFPVTSKGDGEWEIVEGLELDDFVRK 313 (329)
T ss_pred HHHHCC-CHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCEEECCEEEEECCEEEEECCCCCCHHHHH
T ss_conf 998454-6136799999999997168989976267665378878787888827833068741732797368878989999
Q ss_pred HHHHHHHHHHHHHHH
Q ss_conf 999999999999999
Q gi|254781048|r 297 AFQKSVKATVDLCNS 311 (320)
Q Consensus 297 ~l~~sa~~i~~~~~~ 311 (320)
T Consensus 314 ~~~~t~~EL~~Eke~ 328 (329)
T TIGR01759 314 KLDATAKELLEEKEE 328 (329)
T ss_pred HHHHHHHHHHHHHHC
T ss_conf 986509999999731