HHsearch alignment for GI: 254781048 and conserved domain: TIGR01759

>TIGR01759 MalateDH-SF1 malate dehydrogenase; InterPro: IPR010945 Malate dehydrogenases catalyse the interconversion of malate and oxaloacetate using dinucleotide cofactors . The enzymes in this entry are found in archaea, bacteria and eukaryotes and fall into two distinct groups. The first group are cytoplamsic, NAD-dependent enzymes which participate in the citric acid cycle (1.1.1.37 from EC). The second group are found in plant chloroplasts, use NADP as cofactor, and participate in the C4 cycle (1.1.1.82 from EC). Structural studies indicate that these enzymes are homodimers with very sinmilar overall topology, though the chloroplast enzymes also have N- and C-terminal extensions, and all contain the classical Rossman fold for NAD(P)H binding , , , . Substrate specificity is determined by a mobile loop at the active site which uses charge balancing to discriminate between the correct substrates (malate and oxaloacetate) and other potential oxo/hydroxyacid substrates the enzyme may encounter within the cell .; GO: 0016615 malate dehydrogenase activity, 0006108 malate metabolic process.
Probab=100.00  E-value=0  Score=407.62  Aligned_cols=304  Identities=26%  Similarity=0.386  Sum_probs=273.8

Q ss_pred             CCCCEEEEECC-CCHHHHHHHHHHHCCC-C-----EEEEEECCC--CCHHHHHHHHHHHCCCCCCCCEEEECCC-HHHHC
Q ss_conf             99872899889-8136899999995799-8-----699996578--8128988307620544688756852697-48837
Q gi|254781048|r    1 MKSNKIALIGS-GMIGGTLAHLAVLKKL-G-----DVVLLDIVD--GMPRGKALDIAESSPVEGFGAQLCGTSD-YSDIA   70 (320)
Q Consensus         1 mk~~KV~IIGa-G~VG~~~a~~~~~~~l-~-----ei~L~D~~~--~~~~g~~~Dl~~~~~~~~~~~~v~~~~d-~~~l~   70 (320)
T Consensus         1 ~~p~rV~VTGAAGQI~Y~Ll~~iA~G~~fG~Dqpv~L~LLdIP~A~~~LeGV~MEL~DCA--FPlL~~v~~T~~p~eAF~   78 (329)
T TIGR01759         1 KKPVRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPQAMKALEGVVMELEDCA--FPLLAGVVATTDPEEAFK   78 (329)
T ss_pred             CCCEEEEEECCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCC--CCCCCCCEECCCHHHHHC
T ss_conf             995379973744678999988985561048898468886077233113344355353064--522351122168687518


Q ss_pred             CCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC-CCCCEEEECCCCHHHHHHHHHHC--CCCHHHHHHHCCC
Q ss_conf             89789995566667655746789988999999997654126-67408871484207899998844--9986561100052
Q gi|254781048|r   71 EADVCIVTAGIPRKPSMSRDDLLADNLKAIEKVGAGIRKYA-PNSFVICITNPLDAMVWALQKFS--GLPSHMVVGMAGI  147 (320)
Q Consensus        71 ~aDivVitag~~~~~g~~R~dll~~N~~i~~~i~~~i~~~~-p~~i~ivvtNPvDv~~~~~~~~s--g~~~~rViG~Gt~  147 (320)
T Consensus        79 dvD~AlLvGa~PRK~GMER~DLL~~Ng~IF~~QG~aLn~~Ak~~vKVLVVGNPaNTNaLIa~~~AP~~ip~-~Nf~AmtR  157 (329)
T TIGR01759        79 DVDVALLVGAFPRKPGMERRDLLSKNGKIFKEQGKALNKVAKKDVKVLVVGNPANTNALIASKNAPKKIPP-KNFSAMTR  157 (329)
T ss_pred             CCCEEEEECCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCCCCCC-CCCCHHHH
T ss_conf             98757761366895884479998722254687999999861898569985298627999999706865651-11102002


Q ss_pred             HHHHHHHHHHHHHCCCCCCCC-EEEEECCCCCEEEEECCCCCCC----CCHHHHHHHCCCCCHHHHHHHHHHHHCCHHHH
Q ss_conf             568999999999719873355-0567507885246510235447----70155430015878767999984551015888
Q gi|254781048|r  148 LDSARFRYFLAQEFGVSVESV-TALVLGSHGDSMVPMLRYATVS----GIPVSDLVKLGWTTQEKIDQIVKRTREGGAEI  222 (320)
Q Consensus       148 LDs~R~~~~ia~~l~v~~~~V-~~~ViGeHGds~vp~~S~~~v~----g~p~~~~~~~~~~~~~~~~~l~~~v~~~g~~i  222 (320)
T Consensus       158 LDhNRA~~qlA~K~Gv~~~~V~nv~iWGNHS~tQvPD~~~A~v~~~~~~~pV~e~i~d~~Wl~---g~F~~~Vq~RG~Av  234 (329)
T TIGR01759       158 LDHNRAKSQLAAKLGVPVSDVKNVIIWGNHSNTQVPDVTHATVDKDGKGKPVKELIKDDDWLE---GEFIPTVQQRGAAV  234 (329)
T ss_pred             HHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCEEEEECCCCCEECCCCCCCCCCCC---CCCHHHHHHHHHHH
T ss_conf             247899999998758960113237997027876564453116874899341523346532100---43201032258999


Q ss_pred             HHHHCCCCCCCCCHHHHHHHHHHHHCCC--CEEEEEEEEE-CC-CCCC-CCEEEEEEEEECCCCCEEEEC-CCCCHHHHH
Q ss_conf             8751576543220323234455452889--7499999997-36-4475-634788769997872288847-999889999
Q gi|254781048|r  223 VGLLRSGSAYYAPASSAIAIAESYLKNK--KNLLPCAAHL-SG-QYGV-EGFYVGVPVVIGHKGVEKIVE-LNLSFDEKD  296 (320)
Q Consensus       223 i~~~~kg~t~~~~a~a~~~ii~aIl~~~--~~v~~~s~~~-~g-~yg~-~~v~~s~P~vig~~Gi~~i~~-l~Ls~~E~~  296 (320)
T Consensus       235 I~~RG~-SSAASAA~AA~dh~rdW~~GTpeG~~vSm~V~sp~GNpYGip~Gi~fSfPv~~~~~G~w~iV~Gl~~~df~r~  313 (329)
T TIGR01759       235 IEARGA-SSAASAANAAIDHVRDWVLGTPEGDWVSMGVYSPDGNPYGIPEGIIFSFPVTSKGDGEWEIVEGLELDDFVRK  313 (329)
T ss_pred             HHHHCC-CHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCEEECCEEEEECCEEEEECCCCCCHHHHH
T ss_conf             998454-6136799999999997168989976267665378878787888827833068741732797368878989999


Q ss_pred             HHHHHHHHHHHHHHH
Q ss_conf             999999999999999
Q gi|254781048|r  297 AFQKSVKATVDLCNS  311 (320)
Q Consensus       297 ~l~~sa~~i~~~~~~  311 (320)
T Consensus       314 ~~~~t~~EL~~Eke~  328 (329)
T TIGR01759       314 KLDATAKELLEEKEE  328 (329)
T ss_pred             HHHHHHHHHHHHHHC
T ss_conf             986509999999731