HHsearch alignment for GI: 254781048 and conserved domain: TIGR01772
>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent; InterPro: IPR010097 This entry represents the NAD-dependent malate dehydrogenase found in eukaryotes and certain gamma proteobacteria. The enzyme is involved in the citric acid cycle as well as the glyoxalate cycle. Several isoforms exist in eukaryotes. In Saccharomyces cereviseae, for example, there are cytoplasmic, mitochondrial and peroxisomal forms. Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities.; GO: 0030060 L-malate dehydrogenase activity, 0006108 malate metabolic process.
Probab=100.00 E-value=0 Score=410.98 Aligned_cols=299 Identities=27% Similarity=0.447 Sum_probs=252.1
Q ss_pred EEEEECC-CCHHHHHHHHHHHC-C-CC-----------EEEEEECCCCCHHHHHHHHHHHC---CCCCCCCEEE-ECCC-
Q ss_conf 2899889-81368999999957-9-98-----------69999657881289883076205---4468875685-2697-
Q gi|254781048|r 5 KIALIGS-GMIGGTLAHLAVLK-K-LG-----------DVVLLDIVDGMPRGKALDIAESS---PVEGFGAQLC-GTSD- 65 (320)
Q Consensus 5 KV~IIGa-G~VG~~~a~~~~~~-~-l~-----------ei~L~D~~~~~~~g~~~Dl~~~~---~~~~~~~~v~-~~~d- 65 (320)
T Consensus 1 KVAVLGA~GGIGQpLSLLLK~~Lp~~slkesnrsvthi~L~LYDi~~ea~~GVa~DLSHI~T~~~v~gf~~~~~~hkrdP 80 (379)
T TIGR01772 1 KVAVLGAAGGIGQPLSLLLKLQLPQVSLKESNRSVTHIELSLYDIKGEAAEGVAADLSHIDTAASVKGFSGEEGDHKRDP 80 (379)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEECCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCC
T ss_conf 96898558642146899998517645752036505677765303456656764313442178645704468888865660
Q ss_pred -H-HHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC--EEEECCCCHHHHHHHH----HHCCCC
Q ss_conf -4-8837897899955666676557467899889999999976541266740--8871484207899998----844998
Q gi|254781048|r 66 -Y-SDIAEADVCIVTAGIPRKPSMSRDDLLADNLKAIEKVGAGIRKYAPNSF--VICITNPLDAMVWALQ----KFSGLP 137 (320)
Q Consensus 66 -~-~~l~~aDivVitag~~~~~g~~R~dll~~N~~i~~~i~~~i~~~~p~~i--~ivvtNPvDv~~~~~~----~~sg~~ 137 (320)
T Consensus 81 ~l~~~L~~advVvIPAGVPRKPGMtRDDLF~~NAgIv~~L~~a~A~~cP~A~vfi~vI~NPVNStVPI~a~~LKk~G~Y~ 160 (379)
T TIGR01772 81 ALENALKGADVVVIPAGVPRKPGMTRDDLFNVNAGIVKDLVAAVAESCPKAMVFILVISNPVNSTVPIAAEVLKKKGVYD 160 (379)
T ss_pred CHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHCCCCC
T ss_conf 14888627958998178788755675567550417899899999740876058999986685651799999999618868
Q ss_pred HHH-----HHHHCCCHHHHHHHHHHHHHCCCC-----------CCCCEEEEECCC-CCEEEEECCCCCCCCCHHHHHHHC
Q ss_conf 656-----110005256899999999971987-----------335505675078-852465102354477015543001
Q gi|254781048|r 138 SHM-----VVGMAGILDSARFRYFLAQEFGVS-----------VESVTALVLGSH-GDSMVPMLRYATVSGIPVSDLVKL 200 (320)
Q Consensus 138 ~~r-----ViG~Gt~LDs~R~~~~ia~~l~v~-----------~~~V~~~ViGeH-Gds~vp~~S~~~v~g~p~~~~~~~ 200 (320)
T Consensus 161 pn~GierrlfGV-T~LD~vRA~tF~~E~~~~~nPkiG~~~~~~p~~~~VpVIGGHSG~TIiPL~sQ~~~~---------- 229 (379)
T TIGR01772 161 PNKGIERRLFGV-TTLDIVRANTFVAEIKNKDNPKIGLEQDKTPMKVNVPVIGGHSGETIIPLISQCNGL---------- 229 (379)
T ss_pred CCCCCCEEECCC-CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCEEECCCCC----------
T ss_conf 887530243141-124689999999997278888667776766530330057067785100204347889----------
Q ss_pred CCCCHHHHHHHHHHHHCCHHHHHHH-HCCCCCCCCCHHHHHHHHHHH---HCC----CCEEEEEEEEEC--CCC------
Q ss_conf 5878767999984551015888875-157654322032323445545---288----974999999973--644------
Q gi|254781048|r 201 GWTTQEKIDQIVKRTREGGAEIVGL-LRSGSAYYAPASSAIAIAESY---LKN----KKNLLPCAAHLS--GQY------ 264 (320)
Q Consensus 201 ~~~~~~~~~~l~~~v~~~g~~ii~~-~~kg~t~~~~a~a~~~ii~aI---l~~----~~~v~~~s~~~~--g~y------ 264 (320)
T Consensus 230 ~~~~~~~~~~Li~RiQ~aGtEVVkAK~G~GSATLSMA~AGakF~~~~v~~l~G~kP~~e~~~e~~-YV~GL~d~~~fPia 308 (379)
T TIGR01772 230 VLLTEDQLEALIHRIQFAGTEVVKAKAGAGSATLSMAFAGAKFALSLVSGLKGEKPEEEGVVECA-YVDGLSDGKKFPIA 308 (379)
T ss_pred CCCCHHHHHHHHCEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEE-EECCCCCCCCCCCC
T ss_conf 88887889865100530483688701778962478999999999999998558987416637999-50776663337879
Q ss_pred ---------CCCCEEEEEEEEECCCCCE--EEECC-CCCHHH-HHHHHHHHHHHHH----HHHHHHHH
Q ss_conf ---------7563478876999787228--88479-998899-9999999999999----99999976
Q gi|254781048|r 265 ---------GVEGFYVGVPVVIGHKGVE--KIVEL-NLSFDE-KDAFQKSVKATVD----LCNSCTKL 315 (320)
Q Consensus 265 ---------g~~~v~~s~P~vig~~Gi~--~i~~l-~Ls~~E-~~~l~~sa~~i~~----~~~~~~~l 315 (320)
T Consensus 309 PG~~Q~L~~~~~~~fFa~Pl~Lg~~Gv~~v~~~~ig~Ls~~Ere~~L~~~~~~LKksiaknI~KG~~F 376 (379)
T TIGR01772 309 PGKDQLLVLVTEAEFFAIPLVLGKKGVEYVKRLGIGKLSSEEREKMLNGALPELKKSIAKNIEKGEEF 376 (379)
T ss_pred CCHHCCCCCCCCEEEEEEEEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
T ss_conf 85101351233404664223772886688662679997978999999999999998862260320765