HHsearch alignment for GI: 254781048 and conserved domain: TIGR02356
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF; InterPro: IPR012731 Members of the HesA/MoeB/ThiF family of proteins (IPR000594 from INTERPRO) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees. The Escherichia coli ThiF and MoeB proteins are seemingly more closely related than the E. coli ThiF and Campylobacter (for example) ThiF. This entry represents the more widely distributed clade of ThiF proteins as found in E. coli..
Probab=94.53 E-value=0.043 Score=33.66 Aligned_cols=142 Identities=18% Similarity=0.278 Sum_probs=91.9
Q ss_pred CCCCEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCEEEECCCHHHHCCCCEEEEECC
Q ss_conf 99872899889813689999999579986999965788128988307620544688756852697488378978999556
Q gi|254781048|r 1 MKSNKIALIGSGMIGGTLAHLAVLKKLGDVVLLDIVDGMPRGKALDIAESSPVEGFGAQLCGTSDYSDIAEADVCIVTAG 80 (320)
Q Consensus 1 mk~~KV~IIGaG~VG~~~a~~~~~~~l~ei~L~D~~~~~~~g~~~Dl~~~~~~~~~~~~v~~~~d~~~l~~aDivVitag 80 (320)
T Consensus 19 L~~s~VLiiGaGgLGs~~~~~LA~AGVG~i~i~D~D~V-------~~S------NLqRQ~L----f~e---~Dv------ 72 (210)
T TIGR02356 19 LLASHVLIIGAGGLGSPAALYLAAAGVGTITIVDDDHV-------DLS------NLQRQIL----FAE---EDV------ 72 (210)
T ss_pred HHHCCEEEEEECHHHHHHHHHHHHCCCCEEEEEECCEE-------CHH------HCHHHHH----HCH---HHH------
T ss_conf 86086599972614568999998288837899851677-------010------1205543----032---442------
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHH
Q ss_conf 66676557467899889999999976541266740887148420789999884499865611000525689999999997
Q gi|254781048|r 81 IPRKPSMSRDDLLADNLKAIEKVGAGIRKYAPNSFVICITNPLDAMVWALQKFSGLPSHMVVGMAGILDSARFRYFLAQE 160 (320)
Q Consensus 81 ~~~~~g~~R~dll~~N~~i~~~i~~~i~~~~p~~i~ivvtNPvDv~~~~~~~~sg~~~~rViG~Gt~LDs~R~~~~ia~~ 160 (320)
T Consensus 73 -------------~~~~pK~e~aa~~l~~LN~~i~v~a~~~~vt~~-~~~~~i~~~DPdlVlDc--~-DNf~tryliNda 135 (210)
T TIGR02356 73 -------------GTLRPKVEAAAERLRELNSDIRVTALKERVTAE-NLELLIENVDPDLVLDC--T-DNFATRYLINDA 135 (210)
T ss_pred -------------HCCCHHHHHHHHHHHHHCCCCEEEEEEECCCHH-HHHHHHHCCCCCEEEEC--C-CCHHHHHHHHHH
T ss_conf -------------013158999999998538896899854202779-99999623899689615--6-687788999999
Q ss_pred CCCC-CCCCEEEEECCCCCEEEEECC
Q ss_conf 1987-335505675078852465102
Q gi|254781048|r 161 FGVS-VESVTALVLGSHGDSMVPMLR 185 (320)
Q Consensus 161 l~v~-~~~V~~~ViGeHGds~vp~~S 185 (320)
T Consensus 136 C~~~~~PlI~aavvG~~G~~~~f~~~ 161 (210)
T TIGR02356 136 CQALGIPLISAAVVGFEGQVMVFDPG 161 (210)
T ss_pred HHHHCCCEEEEEEEEECCEEEEEECC
T ss_conf 99847986999887635778998468