HHsearch alignment for GI: 254781048 and conserved domain: cd01336
>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=100.00 E-value=0 Score=487.82 Aligned_cols=305 Identities=22% Similarity=0.342 Sum_probs=263.0
Q ss_pred CCCEEEEEC-CCCHHHHHHHHHHHCCC-C-----EEEEEECC--CCCHHHHHHHHHHHCCCCCCCCEEEECCCHHHHCCC
Q ss_conf 987289988-98136899999995799-8-----69999657--881289883076205446887568526974883789
Q gi|254781048|r 2 KSNKIALIG-SGMIGGTLAHLAVLKKL-G-----DVVLLDIV--DGMPRGKALDIAESSPVEGFGAQLCGTSDYSDIAEA 72 (320)
Q Consensus 2 k~~KV~IIG-aG~VG~~~a~~~~~~~l-~-----ei~L~D~~--~~~~~g~~~Dl~~~~~~~~~~~~v~~~~d~~~l~~a 72 (320)
T Consensus 1 ~p~kV~VtGAaG~Ig~~l~~~la~g~~~g~~~~i~L~L~Di~~~~~~l~Gv~mel~d~a-~p~l~~i~~~~~~~~a~~~a 79 (325)
T cd01336 1 EPIRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDCA-FPLLKSVVATTDPEEAFKDV 79 (325)
T ss_pred CCEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEHHHCC-CCCCCCEEECCCHHHHHCCC
T ss_conf 98199998887188999999997588568997059999667786776552674574378-64558735228878983688
Q ss_pred CEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC-CCCCEEEECCCCHHHHHHHHHHC-CCCHHHHHHHCCCHHH
Q ss_conf 789995566667655746789988999999997654126-67408871484207899998844-9986561100052568
Q gi|254781048|r 73 DVCIVTAGIPRKPSMSRDDLLADNLKAIEKVGAGIRKYA-PNSFVICITNPLDAMVWALQKFS-GLPSHMVVGMAGILDS 150 (320)
Q Consensus 73 DivVitag~~~~~g~~R~dll~~N~~i~~~i~~~i~~~~-p~~i~ivvtNPvDv~~~~~~~~s-g~~~~rViG~Gt~LDs 150 (320)
T Consensus 80 Dvvii~ag~prkpGmtR~DLl~~Na~I~k~~~~~I~~~a~p~~~viVv~NPvn~~~~i~~~~a~~~p~~~-i~~~t~LD~ 158 (325)
T cd01336 80 DVAILVGAMPRKEGMERKDLLKANVKIFKEQGEALDKYAKKNVKVLVVGNPANTNALILLKYAPSIPKEN-FTALTRLDH 158 (325)
T ss_pred CEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHCCCCCHHH-EEEEEHHHH
T ss_conf 7899948877999982799999899999999999998614581999927935889999999779996684-998428999
Q ss_pred HHHHHHHHHHCCCCCCCCEEE-EECCCCCEEEEECCCCCC----CCCHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHH
Q ss_conf 999999999719873355056-750788524651023544----770155430015878767999984551015888875
Q gi|254781048|r 151 ARFRYFLAQEFGVSVESVTAL-VLGSHGDSMVPMLRYATV----SGIPVSDLVKLGWTTQEKIDQIVKRTREGGAEIVGL 225 (320)
Q Consensus 151 ~R~~~~ia~~l~v~~~~V~~~-ViGeHGds~vp~~S~~~v----~g~p~~~~~~~~~~~~~~~~~l~~~v~~~g~~ii~~ 225 (320)
T Consensus 159 ~R~~~~lA~kl~v~~~~V~~~iIwG~Hg~t~vP~~s~a~v~~~~~~~~i~~~i~d~~~~---~~e~i~~v~~rG~eIi~~ 235 (325)
T cd01336 159 NRAKSQIALKLGVPVSDVKNVIIWGNHSSTQYPDVNHATVELNGKGKPAREAVKDDAWL---NGEFISTVQKRGAAVIKA 235 (325)
T ss_pred HHHHHHHHHHHCCCHHHEEEEEEEECCCCCEEECCCCCEEECCCCCCCHHHHCCHHHHH---HHHHHHHHHHCHHHHHHH
T ss_conf 99999999985989678466799987989678630312892577871767841645666---667789986058999986
Q ss_pred HCCCCCCCCCHHHHHHHHHHHHCCC--CEEEEEEEEECCCCCC-CCEEEEEEEEECCCCCEEEECCCCCHHHHHHHHHHH
Q ss_conf 1576543220323234455452889--7499999997364475-634788769997872288847999889999999999
Q gi|254781048|r 226 LRSGSAYYAPASSAIAIAESYLKNK--KNLLPCAAHLSGQYGV-EGFYVGVPVVIGHKGVEKIVELNLSFDEKDAFQKSV 302 (320)
Q Consensus 226 ~~kg~t~~~~a~a~~~ii~aIl~~~--~~v~~~s~~~~g~yg~-~~v~~s~P~vig~~Gi~~i~~l~Ls~~E~~~l~~sa 302 (320)
T Consensus 236 ~~-~ssa~saa~A~~~~~~~~~~g~~~~~~~s~~v~~~G~YGi~~gi~fs~Pv~~~~g~~eiV~~l~L~e~ek~~l~~s~ 314 (325)
T cd01336 236 RK-LSSAMSAAKAICDHVHDWWFGTPEGEFVSMGVYSDGSYGVPEGLIFSFPVTCKNGKWKIVQGLSIDDFSREKIDATA 314 (325)
T ss_pred CC-CCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCEEEEEEEECCCEEEEECCCCCCHHHHHHHHHHH
T ss_conf 07-56677799999999999963998787899988727877998882899979982986999768556999999999999
Q ss_pred HHHHHHHHHH
Q ss_conf 9999999999
Q gi|254781048|r 303 KATVDLCNSC 312 (320)
Q Consensus 303 ~~i~~~~~~~ 312 (320)
T Consensus 315 ~eL~eE~~~a 324 (325)
T cd01336 315 KELVEEKETA 324 (325)
T ss_pred HHHHHHHHHH
T ss_conf 9999999843