HHsearch alignment for GI: 254781048 and conserved domain: cd05212
>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional
Probab=93.81 E-value=0.36 Score=27.65 Aligned_cols=56 Identities=27% Similarity=0.421 Sum_probs=39.1
Q ss_pred CCCCEEEEECC-CCHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCEEEECCCH-HHHCCCCEEEEE
Q ss_conf 99872899889-8136899999995799869999657881289883076205446887568526974-883789789995
Q gi|254781048|r 1 MKSNKIALIGS-GMIGGTLAHLAVLKKLGDVVLLDIVDGMPRGKALDIAESSPVEGFGAQLCGTSDY-SDIAEADVCIVT 78 (320)
Q Consensus 1 mk~~KV~IIGa-G~VG~~~a~~~~~~~l~ei~L~D~~~~~~~g~~~Dl~~~~~~~~~~~~v~~~~d~-~~l~~aDivVit 78 (320)
T Consensus 26 l~Gk~vvVvGrS~~VG~Pla~lL~~~~a-tVt~~hs~--------------------------t~~l~~~~~~ADIvI~a 78 (140)
T cd05212 26 LDGKKVLVVGRSGIVGAPLQCLLQRDGA-TVYSCDWK--------------------------TIQLQSKVHDADVVVVG 78 (140)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEECCC--------------------------CCCHHHHHHHCCEEEEC
T ss_conf 9999999999981249999999997889-89994699--------------------------95989985234999981
Q ss_pred CCCCC
Q ss_conf 56666
Q gi|254781048|r 79 AGIPR 83 (320)
Q Consensus 79 ag~~~ 83 (320)
T Consensus 79 ~G~p~ 83 (140)
T cd05212 79 SPKPE 83 (140)
T ss_pred CCCCC
T ss_conf 68767