HHsearch alignment for GI: 254781048 and conserved domain: cd05290
>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=100.00 E-value=0 Score=654.23 Aligned_cols=304 Identities=30% Similarity=0.517 Sum_probs=294.2
Q ss_pred EEEEECCCCHHHHHHHHHHHCCC-CEEEEEECCCCCHHHHHHHHHHHCCCCCCCCEEEECCCHHHHCCCCEEEEECCCCC
Q ss_conf 28998898136899999995799-86999965788128988307620544688756852697488378978999556666
Q gi|254781048|r 5 KIALIGSGMIGGTLAHLAVLKKL-GDVVLLDIVDGMPRGKALDIAESSPVEGFGAQLCGTSDYSDIAEADVCIVTAGIPR 83 (320)
Q Consensus 5 KV~IIGaG~VG~~~a~~~~~~~l-~ei~L~D~~~~~~~g~~~Dl~~~~~~~~~~~~v~~~~d~~~l~~aDivVitag~~~ 83 (320)
T Consensus 1 KI~IIGaG~VG~~~A~~l~~~~~~~elvL~Di~~~~a~g~a~Dl~h~~~~~~~~~~~~~~~~y~~~~~aDiVVitaG~~~ 80 (307)
T cd05290 1 KLVVIGAGHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRAGDYDDCADADIIVITAGPSI 80 (307)
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCCEEECCCCHHHHCCCCEEEECCCCCC
T ss_conf 98999969899999999985699887999928898237999987612035899865866799899469999998677765
Q ss_pred CCCCC--HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHC
Q ss_conf 76557--4678998899999999765412667408871484207899998844998656110005256899999999971
Q gi|254781048|r 84 KPSMS--RDDLLADNLKAIEKVGAGIRKYAPNSFVICITNPLDAMVWALQKFSGLPSHMVVGMAGILDSARFRYFLAQEF 161 (320)
Q Consensus 84 ~~g~~--R~dll~~N~~i~~~i~~~i~~~~p~~i~ivvtNPvDv~~~~~~~~sg~~~~rViG~Gt~LDs~R~~~~ia~~l 161 (320)
T Consensus 81 kpg~t~~R~dL~~~N~~I~~~i~~~i~~~~p~~i~ivvsNPvDvmt~~~~k~sg~p~~rViG~Gt~LDsaR~r~~la~~l 160 (307)
T cd05290 81 DPGNTDDRLDLAQTNAKIIREIMGNITKVTKEAVIILITNPLDIAVYIAATEFDYPANKVIGTGTMLDTARLRRIVADKY 160 (307)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHH
T ss_conf 89998358888885789999999998613997499984793889999999984899357872022177899999999984
Q ss_pred CCCCCCCEEEEECCCCCEEEEECCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCHHHHHH
Q ss_conf 98733550567507885246510235447701554300158787679999845510158888751576543220323234
Q gi|254781048|r 162 GVSVESVTALVLGSHGDSMVPMLRYATVSGIPVSDLVKLGWTTQEKIDQIVKRTREGGAEIVGLLRSGSAYYAPASSAIA 241 (320)
Q Consensus 162 ~v~~~~V~~~ViGeHGds~vp~~S~~~v~g~p~~~~~~~~~~~~~~~~~l~~~v~~~g~~ii~~~~kg~t~~~~a~a~~~ 241 (320)
T Consensus 161 ~v~~~~V~a~VlGeHGds~vp~wS~~~v~G~pl~~~~~~~~~~~~~~~~i~~~v~~~g~~ii~--~kG~t~~gia~a~~~ 238 (307)
T cd05290 161 GVDPKNVTGYVLGEHGSHAFPVWSLVNIAGLPLDELEALFGKEPIDKDELLEEVVQAAYDVFN--RKGWTNAGIAKSASR 238 (307)
T ss_pred CCCCCCCEEEEEECCCCCEEEEEECCEECCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH--CCCCCHHHHHHHHHH
T ss_conf 999343320587447995787410132888988998751598744399999998602488885--258831999999999
Q ss_pred HHHHHHCCCCEEEEEEEEECCCCCCCCEEEEEEEEECCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 455452889749999999736447563478876999787228884799988999999999999999999
Q gi|254781048|r 242 IAESYLKNKKNLLPCAAHLSGQYGVEGFYVGVPVVIGHKGVEKIVELNLSFDEKDAFQKSVKATVDLCN 310 (320)
Q Consensus 242 ii~aIl~~~~~v~~~s~~~~g~yg~~~v~~s~P~vig~~Gi~~i~~l~Ls~~E~~~l~~sa~~i~~~~~ 310 (320)
T Consensus 239 iv~aIl~d~~~vlpvs~~l~g~yg~~~v~lsvP~viG~~Gve~v~el~L~~~E~~~l~~Sa~~ik~~ie 307 (307)
T cd05290 239 LIKAILLDERSILPVCTLLSGEYGLSDVALSLPTVIGAKGIERVLEIPLDEWELEKLHKSAKAIRETIE 307 (307)
T ss_pred HHHHHHHHCCEEEEEEEEEECCCCCCCEEEEEEEEECCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCC
T ss_conf 999998415907766787605667435899988999548333835999899999999999999998619