HHsearch alignment for GI: 254781048 and conserved domain: cd05291
>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases. L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine
Probab=100.00 E-value=0 Score=647.76 Aligned_cols=305 Identities=35% Similarity=0.609 Sum_probs=295.2
Q ss_pred CEEEEECCCCHHHHHHHHHHHCCC-CEEEEEECCCCCHHHHHHHHHHHCCCCCCCCEEEECCCHHHHCCCCEEEEECCCC
Q ss_conf 728998898136899999995799-8699996578812898830762054468875685269748837897899955666
Q gi|254781048|r 4 NKIALIGSGMIGGTLAHLAVLKKL-GDVVLLDIVDGMPRGKALDIAESSPVEGFGAQLCGTSDYSDIAEADVCIVTAGIP 82 (320)
Q Consensus 4 ~KV~IIGaG~VG~~~a~~~~~~~l-~ei~L~D~~~~~~~g~~~Dl~~~~~~~~~~~~v~~~~d~~~l~~aDivVitag~~ 82 (320)
T Consensus 1 rKI~IIGaG~VG~~~a~~l~~~~l~~el~L~Di~~~~a~G~a~DL~~~~~~~~~~~~i-~~~~~~~~~~aDvvVitAG~~ 79 (306)
T cd05291 1 RKVVIIGAGHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKI-KAGDYSDCKDADIVVITAGAP 79 (306)
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEE-EECCHHHHCCCCEEEECCCCC
T ss_conf 9599999698899999999857998779998189870176999887013305997399-608878847899999906766
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHCC
Q ss_conf 67655746789988999999997654126674088714842078999988449986561100052568999999999719
Q gi|254781048|r 83 RKPSMSRDDLLADNLKAIEKVGAGIRKYAPNSFVICITNPLDAMVWALQKFSGLPSHMVVGMAGILDSARFRYFLAQEFG 162 (320)
Q Consensus 83 ~~~g~~R~dll~~N~~i~~~i~~~i~~~~p~~i~ivvtNPvDv~~~~~~~~sg~~~~rViG~Gt~LDs~R~~~~ia~~l~ 162 (320)
T Consensus 80 rk~g~~R~dLl~~N~~I~k~i~~~i~~~~p~aivivvtNPvDvmt~~~~k~sg~p~~rViG~gT~LDs~R~~~~ia~~l~ 159 (306)
T cd05291 80 QKPGETRLDLLEKNAKIMKSIVPKIKASGFDGIFLVASNPVDVITYVVQKLSGLPKNRVIGTGTSLDTARLRRALAEKLN 159 (306)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHCCCCHHHEECCCCHHHHHHHHHHHHHHHC
T ss_conf 79999878999978999999999987229971899935816789999998509986661154540899999999999859
Q ss_pred CCCCCCEEEEECCCCCEEEEECCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCHHHHHHH
Q ss_conf 87335505675078852465102354477015543001587876799998455101588887515765432203232344
Q gi|254781048|r 163 VSVESVTALVLGSHGDSMVPMLRYATVSGIPVSDLVKLGWTTQEKIDQIVKRTREGGAEIVGLLRSGSAYYAPASSAIAI 242 (320)
Q Consensus 163 v~~~~V~~~ViGeHGds~vp~~S~~~v~g~p~~~~~~~~~~~~~~~~~l~~~v~~~g~~ii~~~~kg~t~~~~a~a~~~i 242 (320)
T Consensus 160 v~~~~V~~~ViGeHG~s~vp~~S~~~V~G~~l~~~~~~~~~~~~~~~~i~~~v~~~g~~ii~--~kG~t~~~~a~a~~~i 237 (306)
T cd05291 160 VDPRSVHAYVLGEHGDSQFVAWSTVTVGGKPLLDLLKEGKLSELDLDEIEEDVRKAGYEIIN--GKGATYYGIATALARI 237 (306)
T ss_pred CCHHHCEEEEEECCCCCEEEEEEEEEECCEEHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH--CCCCCCHHHHHHHHHH
T ss_conf 99556334688546894562135304888989996124689988999999999976888861--3678501589999999
Q ss_pred HHHHHCCCCEEEEEEEEECCCCCCCCEEEEEEEEECCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 554528897499999997364475634788769997872288847999889999999999999999999
Q gi|254781048|r 243 AESYLKNKKNLLPCAAHLSGQYGVEGFYVGVPVVIGHKGVEKIVELNLSFDEKDAFQKSVKATVDLCNS 311 (320)
Q Consensus 243 i~aIl~~~~~v~~~s~~~~g~yg~~~v~~s~P~vig~~Gi~~i~~l~Ls~~E~~~l~~sa~~i~~~~~~ 311 (320)
T Consensus 238 ~~ail~d~~~v~~vs~~~~g~yg~~~v~~s~P~~ig~~Gv~~i~~l~L~~~E~~~l~~sa~~lk~~i~~ 306 (306)
T cd05291 238 VKAILNDENAILPVSAYLDGEYGEKDVYIGVPAIIGRNGVEEVIELDLTEEEQEKFEKSADIIKENIKK 306 (306)
T ss_pred HHHHHCCCCEEEEEEEEECCCCCCCCEEEEEEEEECCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCC
T ss_conf 999965898079999986477787577999889983781689779999999999999999999998329