HHsearch alignment for GI: 254781048 and conserved domain: pfam02719
>pfam02719 Polysacc_synt_2 Polysaccharide biosynthesis protein. This is a family of diverse bacterial polysaccharide biosynthesis proteins including the CapD protein, WalL protein mannosyl-transferase and several putative epimerases (e.g. WbiI).
Probab=97.71 E-value=0.0044 Score=40.09 Aligned_cols=218 Identities=17% Similarity=0.209 Sum_probs=111.2
Q ss_pred EEEEC-CCCHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCEEE--ECCCHHHH----C--CCCEEE
Q ss_conf 89988-981368999999957998699996578812898830762054468875685--26974883----7--897899
Q gi|254781048|r 6 IALIG-SGMIGGTLAHLAVLKKLGDVVLLDIVDGMPRGKALDIAESSPVEGFGAQLC--GTSDYSDI----A--EADVCI 76 (320)
Q Consensus 6 V~IIG-aG~VG~~~a~~~~~~~l~ei~L~D~~~~~~~g~~~Dl~~~~~~~~~~~~v~--~~~d~~~l----~--~aDivV 76 (320)
T Consensus 1 ILVTGGaGFIGS~Lv~~Ll~~g~~~v~v~d~~~~~~~~~~~~l~~~~~~~--~~~~~~~DI~D~~~l~~~~~~~~~D~V~ 78 (280)
T pfam02719 1 VLVTGGGGSIGSELCRQILKFNPKKIILFSRDEFKLYEIEQELREEYNDP--KLRFFIGDVRDRERLERAMEEYGVDTVF 78 (280)
T ss_pred EEEECCCCHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCCC--CEEEEECCCCCHHHHHHHHHHCCCCEEE
T ss_conf 79974886799999999996899889999088742778999988626789--8389981168989999998754999999
Q ss_pred EECCCCCCCC--CCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEC----CCCHHHHHHHHHHCCCCHHHHHHHCCCHHH
Q ss_conf 9556666765--5746789988999999997654126674088714----842078999988449986561100052568
Q gi|254781048|r 77 VTAGIPRKPS--MSRDDLLADNLKAIEKVGAGIRKYAPNSFVICIT----NPLDAMVWALQKFSGLPSHMVVGMAGILDS 150 (320)
Q Consensus 77 itag~~~~~g--~~R~dll~~N~~i~~~i~~~i~~~~p~~i~ivvt----NPvDv~~~~~~~~sg~~~~rViG~Gt~LDs 150 (320)
T Consensus 79 HlAA~~~V~~s~~~P~~~~~~Nv~gT~nlLe~a~~~~vk~~v~~STd~a~~P~s~--Yg~s--------K~~-------~ 141 (280)
T pfam02719 79 HAAALKHVPLVEYNPMEAIKTNVLGTENVAEAAIENGVEKFVLISTDKAVNPTNV--MGAT--------KRL-------A 141 (280)
T ss_pred ECHHHCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCC--CCCC--------HHH-------H
T ss_conf 8103116532766999999887277799998888539624551476644569984--5423--------777-------8
Q ss_pred HHHHHHHHHHCCCCCCCC----EEEEECCCCCEEEEECCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHCCH-----HH
Q ss_conf 999999999719873355----056750788524651023544770155430015878767999984551015-----88
Q gi|254781048|r 151 ARFRYFLAQEFGVSVESV----TALVLGSHGDSMVPMLRYATVSGIPVSDLVKLGWTTQEKIDQIVKRTREGG-----AE 221 (320)
Q Consensus 151 ~R~~~~ia~~l~v~~~~V----~~~ViGeHGds~vp~~S~~~v~g~p~~~~~~~~~~~~~~~~~l~~~v~~~g-----~~ 221 (320)
T Consensus 142 E~l~~~y~~~~~~~~~~~~~lR~fNVyGprg-sVIp~Fi~~~~~~~pi~I~dg~qtRdf~~V~D~v~~~l~a~~~~~~ge 220 (280)
T pfam02719 142 EKLFQAANRESGSGKTRFSAVRFGNVLGSRG-SVIPLFKKQIAEGGPVTVTHPDMTRFFMTIPEAVQLVLQAGAMGKGGE 220 (280)
T ss_pred HHHHHHHHHHHCCCCCEEEEEEECCEECCCC-CCHHHHHHHHHCCCCEEECCCCCEEEEEEHHHHHHHHHHHHHHCCCCC
T ss_conf 9999999997199985489875445028997-709999999985998656599843855879999999999997287786
Q ss_pred HHHHHCCCCCCCCCHHHHHHHHHHHHCC
Q ss_conf 8875157654322032323445545288
Q gi|254781048|r 222 IVGLLRSGSAYYAPASSAIAIAESYLKN 249 (320)
Q Consensus 222 ii~~~~kg~t~~~~a~a~~~ii~aIl~~ 249 (320)
T Consensus 221 ifni-g~-----g~~~sI~dLAk~i~~~ 242 (280)
T pfam02719 221 IFVL-DM-----GEPVKIVDLAKAMIGD 242 (280)
T ss_pred EEEC-CC-----CCCEEHHHHHHHHCCC
T ss_conf 7888-89-----9866999999975479