RPSBLAST alignment for GI: 254781048 and conserved domain: cd05291
>gnl|CDD|133427 cd05291, HicDH_like, L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases. L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. Length = 306
Score = 252 bits (645), Expect = 1e-67
Identities = 107/301 (35%), Positives = 178/301 (59%), Gaps = 4/301 (1%)
Query: 4 NKIALIGSGMIGGTLAHLAVLKKLGD-VVLLDIVDGMPRGKALDIAESSPVEGFGAQLCG 62
K+ +IG+G +G + A+ V + + D +VL+DI + G+ALD+ ++ ++
Sbjct: 1 RKVVIIGAGHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKA 60
Query: 63 TSDYSDIAEADVCIVTAGIPRKPSMSRDDLLADNLKAIEKVGAGIRKYAPNSFVICITNP 122
DYSD +AD+ ++TAG P+KP +R DLL N K ++ + I+ + + +NP
Sbjct: 61 G-DYSDCKDADIVVITAGAPQKPGETRLDLLEKNAKIMKSIVPKIKASGFDGIFLVASNP 119
Query: 123 LDAMVWALQKFSGLPSHMVVGMAGILDSARFRYFLAQEFGVSVESVTALVLGSHGDSMVP 182
+D + + +QK SGLP + V+G LD+AR R LA++ V SV A VLG HGDS
Sbjct: 120 VDVITYVVQKLSGLPKNRVIGTGTSLDTARLRRALAEKLNVDPRSVHAYVLGEHGDSQFV 179
Query: 183 MLRYATVSGIPVSDLVKLGWTTQEKIDQIVKRTREGGAEIVGLLRSGSAYYAPASSAIAI 242
TV G P+ DL+K G ++ +D+I + R+ G EI+ G+ YY A++ I
Sbjct: 180 AWSTVTVGGKPLLDLLKEGKLSELDLDEIEEDVRKAGYEIIN--GKGATYYGIATALARI 237
Query: 243 AESYLKNKKNLLPCAAHLSGQYGVEGFYVGVPVVIGHKGVEKIVELNLSFDEKDAFQKSV 302
++ L ++ +LP +A+L G+YG + Y+GVP +IG GVE+++EL+L+ +E++ F+KS
Sbjct: 238 VKAILNDENAILPVSAYLDGEYGEKDVYIGVPAIIGRNGVEEVIELDLTEEEQEKFEKSA 297
Query: 303 K 303
Sbjct: 298 D 298