HHsearch alignment for GI: 254781049 and conserved domain: COG0045
>COG0045 SucC Succinyl-CoA synthetase, beta subunit [Energy production and conversion].
Probab=100.00 E-value=0 Score=970.94 Aligned_cols=384 Identities=55% Similarity=0.879 Sum_probs=377.8
Q ss_pred CCCCHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHH
Q ss_conf 98657999999998689888815747999999999872998699971213687656565567777777079958999999
Q gi|254781049|r 1 MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVI 80 (398)
Q Consensus 1 M~L~EyqaK~lL~~~GIpvp~g~~a~s~~ea~~~a~~ig~p~~VvKaQV~aGgRGKa~~~~~hk~~~GGV~l~~s~~ea~ 80 (398)
T Consensus 1 M~lhEYqaKelf~~~GiPvp~g~v~~s~eea~~~a~~lg~~~~VvKaQV~aGGRGKa----------GGVk~~~s~~ea~ 70 (387)
T COG0045 1 MNLHEYQAKELFAKYGIPVPPGYVATSPEEAEEAAKELGGGPVVVKAQVHAGGRGKA----------GGVKLAKSPEEAK 70 (387)
T ss_pred CCHHHHHHHHHHHHCCCCCCCCEEEECHHHHHHHHHHHCCCCEEEEEEEEECCCCCC----------CCEEEECCHHHHH
T ss_conf 967888899899972998999545408999999999818996799922530576666----------7668838989999
Q ss_pred HHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCCC-EEEEEEEEEECCCCCEEEEEECCCCCCHHHHHHHCHHHHEEEEC
Q ss_conf 99998618765442122222443301103455565-05899999834778048998447884024555748312203321
Q gi|254781049|r 81 SDIREILGSTLITKQTGPTGSRVNCVYVEDGADIL-RELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLI 159 (398)
Q Consensus 81 ~~a~~ilg~~l~t~qt~~~G~~v~~vLVEe~v~~~-~E~ylgi~~Dr~~~~~vii~S~~GGvdIE~va~~~p~~I~~~~i 159 (398)
T Consensus 71 ~~a~~~lg~~---~q~~~~G~~v~~vlvee~~~~~~~E~Ylsiv~DR~~~~p~~~~S~eGGmDIEeVa~~~PekI~~~~i 147 (387)
T COG0045 71 EAAEEILGKN---YQTDIKGEPVNKVLVEEAVDIIKKEYYLSIVLDRSSRRPVLMASTEGGMDIEEVAEKTPEKIVKVSV 147 (387)
T ss_pred HHHHHHHCCC---CCCCCCCCEEEEEEEEECCCCCCCEEEEEEEEECCCCCEEEEEECCCCCCHHHHHHHCHHHEEEEEE
T ss_conf 9999984866---5457688454289997467776433799999973778379999667795189950028345268974
Q ss_pred CCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCC-CEEEEEEEEEECCCHHHHHHH
Q ss_conf 4445789578887887519888998859999999989999559751023267990599-679940013215735564102
Q gi|254781049|r 160 DPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNG-RLRVLDSKISFDDNALYRHLD 238 (398)
Q Consensus 160 d~~~gl~~~~~~~l~~~lg~~~~~~~~~~~ii~~L~~~f~e~Da~liEINPLvvt~dg-~vvAlDAKi~iDDnA~fR~~~ 238 (398)
T Consensus 148 dp~~g~~~~~aR~la~~lgl~~~~~~~~~~ii~~ly~~f~~~Da~lvEINPLvvt~~~g~v~aLDaKi~~DdnAlfRHp~ 227 (387)
T COG0045 148 DPLTGLRPYQARELAFKLGLEGELVKQVADIIKKLYKLFVEKDATLVEINPLVVTPDGGDVLALDAKITLDDNALFRHPD 227 (387)
T ss_pred CCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEEECCCCCEEEEEEEEECCCCCCCCCCC
T ss_conf 77668787799999997499878999999999999999997587678752508817998089976454036764346834
Q ss_pred HHHHHCCCCCCHHHHHHHHCCCCEEECCCCEEEEECCCHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHCC
Q ss_conf 78631000156222457753986442288179995550368999999996589962488427888989999999998619
Q gi|254781049|r 239 IQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSD 318 (398)
Q Consensus 239 ~~~~~d~~~~~~~E~~A~~~~l~yv~LdG~Ig~~vnGaGlamatmD~i~~~Gg~pANFlD~gG~a~~e~~~~a~~~il~~ 318 (398)
T Consensus 228 ~~~~~d~~~ed~~e~~a~~~~l~yV~LdG~IG~ivNGAGLaMaTmDii~~~Gg~PANFLDvGGgA~~e~v~~a~~~il~d 307 (387)
T COG0045 228 LAELRDESEEDPREAEASGYGLNYVELDGNIGCIVNGAGLAMATMDIVKLYGGKPANFLDVGGGATAERVKEAFKLILSD 307 (387)
T ss_pred HHHHHCCCCCCHHHHHHHHCCCCEEEECCCEEEEECCHHHHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHHCC
T ss_conf 45553233358557876127875188638378996272699999999998089974144148999988999999998459
Q ss_pred CCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHC
Q ss_conf 9865899963586132899999999999972999879997489858999999997699589949989999999998506
Q gi|254781049|r 319 SSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397 (398)
Q Consensus 319 ~~vk~iliNifGGI~~cd~vA~gii~a~~~~~~~~pivvRl~Gtn~~~g~~il~~~g~~~~~~~~~~~A~~~~v~~~k~ 397 (398)
T Consensus 308 ~~vk~IfVNIfGGI~rcD~vA~GIi~Al~e~~~~vPlVVRL~GtN~e~Gk~iL~esg~~i~~~~~l~~aa~k~v~~~~~ 386 (387)
T COG0045 308 PNVKAIFVNIFGGITRCDEVAEGIIAALKEVGVNVPLVVRLEGTNVEEGKRILAESGLNIIAADDLDEAAEKAVELAKG 386 (387)
T ss_pred CCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHC
T ss_conf 9854899997168675089999999999852988888998678878999999997399407624688999999998514