HHsearch alignment for GI: 254781049 and conserved domain: COG1042
>COG1042 Acyl-CoA synthetase (NDP forming) [Energy production and conversion].
Probab=99.47 E-value=4.5e-14 Score=112.36 Aligned_cols=361 Identities=16% Similarity=0.120 Sum_probs=223.0
Q ss_pred CCCHHHHHHHHHHCC----CCCCCCE------EECCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEE
Q ss_conf 865799999999868----9888815------747999999999872998699971213687656565567777777079
Q gi|254781049|r 2 NIHEYQAKALLRKYN----VPVAKGV------VISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVR 71 (398)
Q Consensus 2 ~L~EyqaK~lL~~~G----Ipvp~g~------~a~s~~ea~~~a~~ig~p~~VvKaQV~aGgRGKa~~~~~hk~~~GGV~ 71 (398)
T Consensus 23 ~~vg~~i~~nL~~~g~g~i~PVnp~~~~v~G~~ay~s~~~lp~~~dlav~~-v~~~~---------~~~i~~~~~~kGv~ 92 (598)
T COG1042 23 GKLGYEILRNLLEYGQGKIYPVNPKYDEVLGVKAYTSVADLPDAPDLAVIV-VPAKV---------VPEIVHELGEKGVK 92 (598)
T ss_pred CHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCHHHHCCCCCCCEEEE-ECHHH---------HHHHHHHHCCCCCC
T ss_conf 215799999998568885574276532336631464075578887706898-52445---------68999872005873
Q ss_pred E-ECCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEE--EEEECCCCCEEEEEECCCCCCHHHHHH
Q ss_conf 9-5899999999998618765442122222443301103455565058999--998347780489984478840245557
Q gi|254781049|r 72 V-ESSLKSVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLS--LLVDRTSGMVAFIASTQGGMDIEEVAK 148 (398)
Q Consensus 72 l-~~s~~ea~~~a~~ilg~~l~t~qt~~~G~~v~~vLVEe~v~~~~E~ylg--i~~Dr~~~~~vii~S~~GGvdIE~va~ 148 (398)
T Consensus 93 ~~i~is~gf~e~~~~~~--~~e~~~~~-~a~~~~~rligPn~~G~~~~~~glna~f~p~~~~~---~-~g~~afvsqsga 165 (598)
T COG1042 93 GAIVISAGFREAGEEGM--ELEKELVE-AARKYGMRIIGPNCLGLINPIIGLNATFDPVFGLG---R-GGGGAFVSQSGA 165 (598)
T ss_pred EEEEECHHHHHHHHHHH--HHHHHHHH-HHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCCC---C-CCCEEEEEECHH
T ss_conf 58996245678877676--77889999-98855963862332453112236563126532334---7-887379995257
Q ss_pred HCHHHHEEEECCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHH--------HHHHHHHCCC-CCCCCCEEEECCCCC-
Q ss_conf 483122033214445789578887887519888998859999999--------9899995597-510232679905996-
Q gi|254781049|r 149 DYPQKIFKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPN--------LYKAFCDKDM-SLLEINPLIIMKNGR- 218 (398)
Q Consensus 149 ~~p~~I~~~~id~~~gl~~~~~~~l~~~lg~~~~~~~~~~~ii~~--------L~~~f~e~Da-~liEINPLvvt~dg~- 218 (398)
T Consensus 166 v~---~~il~~~~~~~----~g~s~~vs~gn--~ad~~~~d~~~~~~~D~~tk~i~Ly~E~~~~~r~fl~~a~~~~~~kp 236 (598)
T COG1042 166 VS---FAILDWANEDG----MGFSIKVSLGN--AADRDESDLLEYLADDPRTKAIGLYIEGVKDGRKFLNAARAAERKKP 236 (598)
T ss_pred HH---HHCCCHHHHCC----CCEEEEEEECC--HHHCCCHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCC
T ss_conf 88---76165234268----75369996142--54338446677775276530799984254427999889998735787
Q ss_pred EEEEEEEEEECCCHHH------------------HHHHHHHHHCCCCCCHHHH-HHHHCCCCEEECCC-CEEEEECCCHH
Q ss_conf 7994001321573556------------------4102786310001562224-57753986442288-17999555036
Q gi|254781049|r 219 LRVLDSKISFDDNALY------------------RHLDIQELRDVSEEDSREI-EAKQHNLSYIALDG-NIGCMVNGAGL 278 (398)
Q Consensus 219 vvAlDAKi~iDDnA~f------------------R~~~~~~~~d~~~~~~~E~-~A~~~~l~yv~LdG-~Ig~~vnGaGl 278 (398)
T Consensus 237 ii~lk~gr~~~~akAa~shTgslag~~~~y~Aa~~~agv-----ir~~~~~elf~~~k~l~~~~~~~g~~~~ivtn~Gg~ 311 (598)
T COG1042 237 IIALKAGRSEAGAKAAASHTGSLAGSDEAYDAAFKQAGV-----IRVESIEELFDAAKALSHQPPPAGDRVAIITNGGGP 311 (598)
T ss_pred EEEEECCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHCCC-----EECCCHHHHHHHHHHHCCCCCCCCCCEEEEECCCCC
T ss_conf 799963478788899860261103642002798864072-----231674999999998624899987654789548876
Q ss_pred HHHHHHHHHHCCCCC---------------------CEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEE-ECCCCHHHHH
Q ss_conf 899999999658996---------------------248842788898999999999861998658999-6358613289
Q gi|254781049|r 279 AMATMDIIKLYGGAP---------------------ANFLDVGGGADQDKVAAAFKIITSDSSVKGILI-NIFGGIMRCD 336 (398)
Q Consensus 279 amatmD~i~~~Gg~p---------------------ANFlD~gG~a~~e~~~~a~~~il~~~~vk~ili-NifGGI~~cd 336 (398)
T Consensus 312 gvla~D~l~~~g~~l~~~~~~~~~~l~~~Lp~~~~~~NPvD~~~~a~~e~y~~~~~~~~~~~~~~~llvi~~~~~~~~~~ 391 (598)
T COG1042 312 GVLAADALEERGLKLAELSEETIEKLRSRLPPHASVKNPVDLTGDADAERYKKTLEILLRDENVDALLVIVLPPASADPE 391 (598)
T ss_pred CCCCHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCH
T ss_conf 53225579872887678998999999860695124468734206785788999999986065775589996378778841
Q ss_pred HHHHHHHHHHHHCCCCCC-EEEECCCCCHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHH
Q ss_conf 999999999997299987-999748985899999999769958994998999999999850
Q gi|254781049|r 337 VLVKGILSAVKEVKINIP-LVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVK 396 (398)
Q Consensus 337 ~vA~gii~a~~~~~~~~p-ivvRl~Gtn~~~g~~il~~~g~~~~~~~~~~~A~~~~v~~~k 396 (398)
T Consensus 392 ~~a~~~~~~-~~~~~~k~~v~~~~gg~~~~~~~~~l~~~gip~~--~~pe~a~~a~~~l~~ 449 (598)
T COG1042 392 ETAEAIIRA-TAKKRGKPVVVSSMGGESSEKARRLLEEAGIPTY--PTPERAVKALSALAR 449 (598)
T ss_pred HHHHHHHHH-HHHHCCCCEEEEECCCCCHHHHHHHHHHCCCCCC--CCHHHHHHHHHHHHH
T ss_conf 456788777-7661697659996677652667877641588766--680777889999998