HHsearch alignment for GI: 254781049 and conserved domain: PRK01966
>PRK01966 ddl D-alanyl-alanine synthetase A; Reviewed.
Probab=98.84 E-value=5.8e-07 Score=65.53 Aligned_cols=166 Identities=17% Similarity=0.168 Sum_probs=101.4
Q ss_pred HHHHHHHHHHCCCCCCCCEEECCHH---HHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHH
Q ss_conf 7999999998689888815747999---9999998729986999712136876565655677777770799589999999
Q gi|254781049|r 5 EYQAKALLRKYNVPVAKGVVISSVH---AAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVIS 81 (398)
Q Consensus 5 EyqaK~lL~~~GIpvp~g~~a~s~~---ea~~~a~~ig~p~~VvKaQV~aGgRGKa~~~~~hk~~~GGV~l~~s~~ea~~ 81 (398)
T Consensus 133 K~~tK~i~~~~gI~tp~~~~~~~~~~~~~~~~~~~~l~~P~-iVKP-~~~G------------SS-iGvs~v~~~~el~~ 197 (344)
T PRK01966 133 KILTKRLLAAAGIPQAPYVVLTRSRREEAIAEVEEKLGLPV-FVKP-ANLG------------SS-VGISKVKNEEELEA 197 (344)
T ss_pred HHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHCCCCE-EEEC-CCCC------------CC-CCEEEECCHHHHHH
T ss_conf 99999999987999898399816662345899998618987-9932-8996------------34-32599689999999
Q ss_pred HHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEEEEEECCCCCEEEEEECCCCCCHHHHHHHCHHHHEEEECCC
Q ss_conf 99986187654421222224433011034555650589999983477804899844788402455574831220332144
Q gi|254781049|r 82 DIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDP 161 (398)
Q Consensus 82 ~a~~ilg~~l~t~qt~~~G~~v~~vLVEe~v~~~~E~ylgi~~Dr~~~~~vii~S~~GGvdIE~va~~~p~~I~~~~id~ 161 (398)
T Consensus 198 ai~~a~~~----------~---~~vlvEefI~-GrE~tv~vl~~--~~~~~~l~--~~--Ei~----------------~ 241 (344)
T PRK01966 198 ALDLAFEY----------D---RKVLVEQGIK-GREIECAVLGY--NDEPVASV--PG--EIV----------------K 241 (344)
T ss_pred HHHHHHHC----------C---CCCEEECCCC-CEEEEEEEECC--CCCEEEEC--CE--EEC----------------C
T ss_conf 99999863----------9---7505751244-48999999748--99467731--15--871----------------7
Q ss_pred CCCCCHHHHHHHH-------HHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCEEEEEE
Q ss_conf 4578957888788-------75198889988599999999899995597510232679905996799400
Q gi|254781049|r 162 LIGVTSEDVASLC-------DMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDS 224 (398)
Q Consensus 162 ~~gl~~~~~~~l~-------~~lg~~~~~~~~~~~ii~~L~~~f~e~Da~liEINPLvvt~dg~vvAlDA 224 (398)
T Consensus 242 ~~~fydy~~KY~~~~~~~~~~Pa~l~~~~~~~i~~~a~~~~~~lg~rg~~RiDf---~~d~~g~~y~lEv 308 (344)
T PRK01966 242 DNDFYDYEAKYIDDSGATLVIPADLSEELTEQIRELAIKAFKALGCSGLARVDF---FLTEDGEIYLNEI 308 (344)
T ss_pred CCCCCCHHHCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEE---EEECCCCEEEEEE
T ss_conf 987514888104689716966788999999999999999999819972798989---9908998899982