HHsearch alignment for GI: 254781049 and conserved domain: PRK01966

>PRK01966 ddl D-alanyl-alanine synthetase A; Reviewed.
Probab=98.84  E-value=5.8e-07  Score=65.53  Aligned_cols=166  Identities=17%  Similarity=0.168  Sum_probs=101.4

Q ss_pred             HHHHHHHHHHCCCCCCCCEEECCHH---HHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHH
Q ss_conf             7999999998689888815747999---9999998729986999712136876565655677777770799589999999
Q gi|254781049|r    5 EYQAKALLRKYNVPVAKGVVISSVH---AAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVIS   81 (398)
Q Consensus         5 EyqaK~lL~~~GIpvp~g~~a~s~~---ea~~~a~~ig~p~~VvKaQV~aGgRGKa~~~~~hk~~~GGV~l~~s~~ea~~   81 (398)
T Consensus       133 K~~tK~i~~~~gI~tp~~~~~~~~~~~~~~~~~~~~l~~P~-iVKP-~~~G------------SS-iGvs~v~~~~el~~  197 (344)
T PRK01966        133 KILTKRLLAAAGIPQAPYVVLTRSRREEAIAEVEEKLGLPV-FVKP-ANLG------------SS-VGISKVKNEEELEA  197 (344)
T ss_pred             HHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHCCCCE-EEEC-CCCC------------CC-CCEEEECCHHHHHH
T ss_conf             99999999987999898399816662345899998618987-9932-8996------------34-32599689999999


Q ss_pred             HHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEEEEEECCCCCEEEEEECCCCCCHHHHHHHCHHHHEEEECCC
Q ss_conf             99986187654421222224433011034555650589999983477804899844788402455574831220332144
Q gi|254781049|r   82 DIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDP  161 (398)
Q Consensus        82 ~a~~ilg~~l~t~qt~~~G~~v~~vLVEe~v~~~~E~ylgi~~Dr~~~~~vii~S~~GGvdIE~va~~~p~~I~~~~id~  161 (398)
T Consensus       198 ai~~a~~~----------~---~~vlvEefI~-GrE~tv~vl~~--~~~~~~l~--~~--Ei~----------------~  241 (344)
T PRK01966        198 ALDLAFEY----------D---RKVLVEQGIK-GREIECAVLGY--NDEPVASV--PG--EIV----------------K  241 (344)
T ss_pred             HHHHHHHC----------C---CCCEEECCCC-CEEEEEEEECC--CCCEEEEC--CE--EEC----------------C
T ss_conf             99999863----------9---7505751244-48999999748--99467731--15--871----------------7


Q ss_pred             CCCCCHHHHHHHH-------HHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCEEEEEE
Q ss_conf             4578957888788-------75198889988599999999899995597510232679905996799400
Q gi|254781049|r  162 LIGVTSEDVASLC-------DMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDS  224 (398)
Q Consensus       162 ~~gl~~~~~~~l~-------~~lg~~~~~~~~~~~ii~~L~~~f~e~Da~liEINPLvvt~dg~vvAlDA  224 (398)
T Consensus       242 ~~~fydy~~KY~~~~~~~~~~Pa~l~~~~~~~i~~~a~~~~~~lg~rg~~RiDf---~~d~~g~~y~lEv  308 (344)
T PRK01966        242 DNDFYDYEAKYIDDSGATLVIPADLSEELTEQIRELAIKAFKALGCSGLARVDF---FLTEDGEIYLNEI  308 (344)
T ss_pred             CCCCCCHHHCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEE---EEECCCCEEEEEE
T ss_conf             987514888104689716966788999999999999999999819972798989---9908998899982