HHsearch alignment for GI: 254781049 and conserved domain: PRK05294
>PRK05294 carB carbamoyl phosphate synthase large subunit; Reviewed.
Probab=99.13 E-value=2.6e-10 Score=87.59 Aligned_cols=139 Identities=14% Similarity=0.272 Sum_probs=91.9
Q ss_pred HHHHHHCCCCCCCCEEECCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHCC
Q ss_conf 99999868988881574799999999987299869997121368765656556777777707995899999999998618
Q gi|254781049|r 9 KALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILG 88 (398)
Q Consensus 9 K~lL~~~GIpvp~g~~a~s~~ea~~~a~~ig~p~~VvKaQV~aGgRGKa~~~~~hk~~~GGV~l~~s~~ea~~~a~~ilg 88 (398)
T Consensus 133 ~~~l~~i~~p~~~s~~~~s~~ea~~~a~~igyPv-ivRps~~LGG~g~------------~--i~~n~~eL~~~~~~~~~ 197 (1063)
T PRK05294 133 KEAMKKIGLPVPRSGIAHTMEEALEVAEEIGYPV-IIRPSFTLGGTGG------------G--IAYNREELEEIVERGLD 197 (1063)
T ss_pred HHHHHHCCCCCCCCHHCCCHHHHHHHHHHCCCCE-EEEECCCCCCCCC------------E--EECCHHHHHHHHHHHHH
T ss_conf 9999976999997253099999999998659988-9984421678764------------0--43499999999999996
Q ss_pred CCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEEEEEECCCCCEEEEEECCCCCCHHHHHHHCHHHHEEEECCCCCCCCHH
Q ss_conf 76544212222244330110345556505899999834778048998447884024555748312203321444578957
Q gi|254781049|r 89 STLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGVTSE 168 (398)
Q Consensus 89 ~~l~t~qt~~~G~~v~~vLVEe~v~~~~E~ylgi~~Dr~~~~~vii~S~~GGvdIE~va~~~p~~I~~~~id~~~gl~~~ 168 (398)
T Consensus 198 ~S-----------~~~qvLie~sl~gwkEie~ev~rD~~~n~-i~v~~mE---nidp~GIHtGDSi~v---aP~qTL~d~ 259 (1063)
T PRK05294 198 LS-----------PTTEVLIEESLLGWKEYEMEVMRDKADNC-IIVCSIE---NIDPMGVHTGDSITV---APAQTLTDK 259 (1063)
T ss_pred HC-----------CCCCEEEEHHCCCCEEEEEEEEEECCCCE-EEEEEEC---CCCCCCCCCCCCCEE---CCCCCCCHH
T ss_conf 19-----------99868966111798899999998189998-9995411---354564566672535---688658989
Q ss_pred -------HHHHHHHHCCCC
Q ss_conf -------888788751988
Q gi|254781049|r 169 -------DVASLCDMLELQ 180 (398)
Q Consensus 169 -------~~~~l~~~lg~~ 180 (398)
T Consensus 260 e~q~lR~~a~kI~~~L~iv 278 (1063)
T PRK05294 260 EYQMLRDASIAILREIGVE 278 (1063)
T ss_pred HHHHHHHHHHHHHHHCCCC
T ss_conf 9999999999999982957