HHsearch alignment for GI: 254781049 and conserved domain: PRK08462

Probab=98.81  E-value=1e-07  Score=70.57  Aligned_cols=107  Identities=24%  Similarity=0.370  Sum_probs=81.5

Q ss_pred             HHHHHHHHHCCCCCCCCE--EECCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHH
Q ss_conf             999999998689888815--747999999999872998699971213687656565567777777079958999999999
Q gi|254781049|r    6 YQAKALLRKYNVPVAKGV--VISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDI   83 (398)
Q Consensus         6 yqaK~lL~~~GIpvp~g~--~a~s~~ea~~~a~~ig~p~~VvKaQV~aGgRGKa~~~~~hk~~~GGV~l~~s~~ea~~~a   83 (398)
T Consensus       119 ~~ar~~a~~~gvPvvpg~~~~v~~~~ea~~~a~~iGyPV-~lKas--~GGGGr------------Gmriv~~~~el~~~~  183 (446)
T PRK08462        119 SKAKQVMKRAGVPVIPGSDGALKSYEEAKKIAKEIGYPV-ILKAA--AGGGGR------------GMRVVEDESDLENLY  183 (446)
T ss_pred             HHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCE-EEEEC--CCCCCC------------EEEEECCHHHHHHHH
T ss_conf             989999998599806786787799999999999729956-87632--789987------------428957679999999


Q ss_pred             HHHCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEEEEEECCCCCEEEEE
Q ss_conf             9861876544212222244330110345556505899999834778048998
Q gi|254781049|r   84 REILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIA  135 (398)
Q Consensus        84 ~~ilg~~l~t~qt~~~G~~v~~vLVEe~v~~~~E~ylgi~~Dr~~~~~vii~  135 (398)
T Consensus       184 ~~a~~ea~-------~~fg~~~v~vEk~i~~~rHIEvQvl~D~~-Gn~ihl~  227 (446)
T PRK08462        184 LAAESEAL-------SAFGDGTMYMEKFINNPRHIEVQILGDKH-GNVIHVG  227 (446)
T ss_pred             HHHHHHHH-------HHCCCCCEEEEEEECCCEEEEEEEEECCC-CCEEEEE
T ss_conf             99987788-------60588866999850355078999885289-9888853