HHsearch alignment for GI: 254781049 and conserved domain: cd06300
>cd06300 PBP1_ABC_sugar_binding_like_1 Periplasmic sugar-binding component of uncharacterized ABC-type transport systems that are members of the pentose/hexose sugar-binding protein family of the type I periplasmic binding protein superfamily. Periplasmic sugar-binding component of uncharacterized ABC-type transport systems that are members of the pentose/hexose sugar-binding protein family of the type I periplasmic binding protein superfamily, which consists of two alpha/beta globular domains connected by a three-stranded hinge. This Venus flytrap-like domain undergoes transition from an open to a closed conformational state upon ligand binding. Members of this group are predicted to be involved in the transport of sugar-containing molecules across cellular and organellar membranes; however their substrate specificity is not known in detail.
Probab=95.07 E-value=0.29 Score=27.98 Aligned_cols=104 Identities=22% Similarity=0.221 Sum_probs=65.2
Q ss_pred HHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHH-HCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECC
Q ss_conf 9999996589962488427888989999999998-619986589996358613289999999999997299987999748
Q gi|254781049|r 282 TMDIIKLYGGAPANFLDVGGGADQDKVAAAFKII-TSDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLE 360 (398)
Q Consensus 282 tmD~i~~~Gg~pANFlD~gG~a~~e~~~~a~~~i-l~~~~vk~iliNifGGI~~cd~vA~gii~a~~~~~~~~pivvRl~ 360 (398)
T Consensus 147 f~~~l~~~p~i-~iv~~~~~~~~~~~a~~~~~~~L~~~pdid~I~~~--------d~~a~Ga~~Al~~aG~~~~~~~g~~ 217 (272)
T cd06300 147 AKEVLKEYPGI-KIVGEVYGDWDQAVAQKAVADFLASNPDVDGIWTQ--------GGDAVGAVQAFEQAGRDIPPVTGED 217 (272)
T ss_pred HHHHHHHCCCE-EEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEC--------CCCHHHHHHHHHHCCCCCCEEEEEC
T ss_conf 99998641424-88655448888899999999999868996099977--------8218999999996699988699975
Q ss_pred CCCHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHH
Q ss_conf 98589999999976995899499899999999985
Q gi|254781049|r 361 GANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAV 395 (398)
Q Consensus 361 Gtn~~~g~~il~~~g~~~~~~~~~~~A~~~~v~~~ 395 (398)
T Consensus 218 ~~-~~~~~~~~~~g~~~a~~~q~p~~~G~~av~~a 251 (272)
T cd06300 218 EN-GFLRWRLWKDKGLKGIAISNPPGQSAAALRAA 251 (272)
T ss_pred CC-HHHHHHHHCCCCEEEEEECCHHHHHHHHHHHH
T ss_conf 95-78999983489759999708599999999999