HHsearch alignment for GI: 254781049 and conserved domain: cd07023
>cd07023 S49_Sppa_N_C Signal peptide peptidase A (SppA), a serine protease, has catalytic Ser-Lys dyad. Signal peptide peptidase A (SppA; Peptidase S49; Protease IV): SppA is found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. This subfamily contains members with either a single domain (sometimes referred to as 36K type), such as sohB peptidase, protein C and archaeal signal peptide peptidase, or an amino-terminal domain in addition to the carboxyl-terminal protease domain that is conserved in all the S49 family members (sometimes referred to as 67K type), similar to E. coli and Arabidopsis thaliana SppA peptidases. Site-directed mutagenesis and sequence analysis have shown these SppAs to be serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys dyad
Probab=94.90 E-value=0.17 Score=29.62 Aligned_cols=24 Identities=25% Similarity=0.353 Sum_probs=18.5
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 988899885999999998999955
Q gi|254781049|r 178 ELQGQARIDGGDLFPNLYKAFCDK 201 (398)
Q Consensus 178 g~~~~~~~~~~~ii~~L~~~f~e~ 201 (398)
T Consensus 139 ~~s~e~~~~~~~~ld~~~~~F~~~ 162 (208)
T cd07023 139 PLTEEERAILQALVDDIYDQFVDV 162 (208)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 899999999999999999999999