HHsearch results for GI: 254781049 and protein with PDBid: 1i7n_A
>1i7n_A Synapsin II; synapse, phosphorylation, neuropeptide; 1.90A {Rattus norvegicus} SCOP: c.30.1.5 d.142.1.3 PDB: 1i7l_A 1auv_A 1aux_A*
Probab=97.04 E-value=8e-05 Score=50.02 Aligned_cols=94 Identities=10% Similarity=-0.063 Sum_probs=63.6
Q ss_pred HHHHHHHHHHCCCCCCCCEEE--C--CHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHH
Q ss_conf 799999999868988881574--7--999999999872998699971213687656565567777777079958999999
Q gi|254781049|r 5 EYQAKALLRKYNVPVAKGVVI--S--SVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVI 80 (398)
Q Consensus 5 EyqaK~lL~~~GIpvp~g~~a--~--s~~ea~~~a~~ig~p~~VvKaQV~aGgRGKa~~~~~hk~~~GGV~l~~s~~ea~ 80 (398)
=+.++.+|+++|+|+|+.... . +..+.......+++|+ |+|+ ..|+.|+ ||.++++.++..
T Consensus 114 K~~~~~~l~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~P~-vvKp--~~g~~G~------------Gv~~v~~~~~l~ 178 (309)
T 1i7n_A 114 KPWVFAQMVAIFKTLGGEKFPLIEQTYYPNHREMLTLPTFPV-VVKI--GHAHSGM------------GKVKVENHYDFQ 178 (309)
T ss_dssp HHHHHHHHHHHHHHHCTTTSCBCCCEEESSGGGGSSCCCSSE-EEEE--SSCSTTT------------TEEEECSHHHHH
T ss_pred HHHHHHHHHHCCCCCCCCEEECCCCCCHHHHHHHHHCCCCCE-EEEE--CCCCCCC------------CEEEEECHHHHH
T ss_conf 799999999729999988621056663788777652269998-9997--9888998------------879996558899
Q ss_pred HHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEEEEEEC
Q ss_conf 9999861876544212222244330110345556505899999834
Q gi|254781049|r 81 SDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR 126 (398)
Q Consensus 81 ~~a~~ilg~~l~t~qt~~~G~~v~~vLVEe~v~~~~E~ylgi~~Dr 126 (398)
.+...+.... ..+++|+.++..+|+-+.+.-++
T Consensus 179 ~~~~~~~~~~-------------~~v~ve~~i~~~~d~rv~vi~~~ 211 (309)
T 1i7n_A 179 DIASVVALTQ-------------TYATAEPFIDAKYDIRVQKIGNN 211 (309)
T ss_dssp HHHHHHHHHT-------------CCEEEEECCCEEEEEEEEEETTE
T ss_pred HHHHHHHCCC-------------CCEEEEEEECCCCEEEEEEECCE
T ss_conf 9999997239-------------81589876146725899999998