HHsearch results for GI: 254781049 and protein with PDBid: 1i7n_A

>1i7n_A Synapsin II; synapse, phosphorylation, neuropeptide; 1.90A {Rattus norvegicus} SCOP: c.30.1.5 d.142.1.3 PDB: 1i7l_A 1auv_A 1aux_A*
Probab=97.04  E-value=8e-05  Score=50.02  Aligned_cols=94  Identities=10%  Similarity=-0.063  Sum_probs=63.6

Q ss_pred             HHHHHHHHHHCCCCCCCCEEE--C--CHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHH
Q ss_conf             799999999868988881574--7--999999999872998699971213687656565567777777079958999999
Q gi|254781049|r    5 EYQAKALLRKYNVPVAKGVVI--S--SVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVI   80 (398)
Q Consensus         5 EyqaK~lL~~~GIpvp~g~~a--~--s~~ea~~~a~~ig~p~~VvKaQV~aGgRGKa~~~~~hk~~~GGV~l~~s~~ea~   80 (398)
                      =+.++.+|+++|+|+|+....  .  +..+.......+++|+ |+|+  ..|+.|+            ||.++++.++..
T Consensus       114 K~~~~~~l~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~P~-vvKp--~~g~~G~------------Gv~~v~~~~~l~  178 (309)
T 1i7n_A          114 KPWVFAQMVAIFKTLGGEKFPLIEQTYYPNHREMLTLPTFPV-VVKI--GHAHSGM------------GKVKVENHYDFQ  178 (309)
T ss_dssp             HHHHHHHHHHHHHHHCTTTSCBCCCEEESSGGGGSSCCCSSE-EEEE--SSCSTTT------------TEEEECSHHHHH
T ss_pred             HHHHHHHHHHCCCCCCCCEEECCCCCCHHHHHHHHHCCCCCE-EEEE--CCCCCCC------------CEEEEECHHHHH
T ss_conf             799999999729999988621056663788777652269998-9997--9888998------------879996558899


Q ss_pred             HHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEEEEEEC
Q ss_conf             9999861876544212222244330110345556505899999834
Q gi|254781049|r   81 SDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR  126 (398)
Q Consensus        81 ~~a~~ilg~~l~t~qt~~~G~~v~~vLVEe~v~~~~E~ylgi~~Dr  126 (398)
                      .+...+....             ..+++|+.++..+|+-+.+.-++
T Consensus       179 ~~~~~~~~~~-------------~~v~ve~~i~~~~d~rv~vi~~~  211 (309)
T 1i7n_A          179 DIASVVALTQ-------------TYATAEPFIDAKYDIRVQKIGNN  211 (309)
T ss_dssp             HHHHHHHHHT-------------CCEEEEECCCEEEEEEEEEETTE
T ss_pred             HHHHHHHCCC-------------CCEEEEEEECCCCEEEEEEECCE
T ss_conf             9999997239-------------81589876146725899999998