HHsearch results for GI: 254781049 and protein with PDBid: 1pk8_A
>1pk8_A RAT synapsin I; ATP binding, ATP grAsp, calcium (II) ION, membrane protein; HET: ATP; 2.10A {Rattus norvegicus} SCOP: c.30.1.5 d.142.1.3 PDB: 1px2_A*
Probab=96.11 E-value=0.0022 Score=40.51 Aligned_cols=78 Identities=12% Similarity=0.037 Sum_probs=33.9
Q ss_pred HCCCCCCCCEEECCHH--HHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHCCCCC
Q ss_conf 8689888815747999--99999987299869997121368765656556777777707995899999999998618765
Q gi|254781049|r 14 KYNVPVAKGVVISSVH--AAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREILGSTL 91 (398)
Q Consensus 14 ~~GIpvp~g~~a~s~~--ea~~~a~~ig~p~~VvKaQV~aGgRGKa~~~~~hk~~~GGV~l~~s~~ea~~~a~~ilg~~l 91 (398)
..++|.|+..+++..+ +.......++||+ |||+ ..|+.|+ ||.+++|.+++.+..+.++...
T Consensus 237 ~~~l~~p~~~li~~~~~~~~~~~~~~~~~Pv-VVKp--~~g~~G~------------Gv~~V~~~~el~~~~~~~~~~~- 300 (422)
T 1pk8_A 237 HKKLGTEEFPLIDQTFYPNHKEMLSSTTYPV-VVKM--GHAHSGM------------GKVKVDNQHDFQDIASVVALTK- 300 (422)
T ss_dssp HHHHCTTTSCBCCCEEESSGGGCCCCSSSSE-EEEE--SSCCTTT------------TEEEECSHHHHHHHHHHHHHHT-
T ss_pred CCCCCCCCEEECCCCCHHHHHHHHHCCCCEE-EEEE--CCCCCCC------------CEEEECCCCHHHHHHHHHHHHC-
T ss_conf 2779999600035321256777654148729-9975--7878778------------8899779217999999998618-
Q ss_pred CCCCCCCCCCCCCCEEECCCCCCCEEEE
Q ss_conf 4421222224433011034555650589
Q gi|254781049|r 92 ITKQTGPTGSRVNCVYVEDGADILRELY 119 (398)
Q Consensus 92 ~t~qt~~~G~~v~~vLVEe~v~~~~E~y 119 (398)
..+++||+++..+++-
T Consensus 301 ------------~~v~vEefI~~~~dir 316 (422)
T 1pk8_A 301 ------------TYATAEPFIDAKYDVR 316 (422)
T ss_dssp ------------SCEEEEECCCEEEEEE
T ss_pred ------------CEEEEEECCCCCEEEE
T ss_conf ------------8499996257867999