HHsearch results for GI: 254781049 and protein with PDBid: 2fp4_B
>2fp4_B Succinyl-COA ligase [GDP-forming] beta-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.23.4.1 d.142.1.4 PDB: 2fpg_B* 2fpi_B* 2fpp_B* 1euc_B* 1eud_B*
Probab=100.00 E-value=0 Score=981.33 Aligned_cols=394 Identities=43% Similarity=0.691 Sum_probs=387.6
Q ss_pred CCCCHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHH
Q ss_conf 98657999999998689888815747999999999872998699971213687656565567777777079958999999
Q gi|254781049|r 1 MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVI 80 (398)
Q Consensus 1 M~L~EyqaK~lL~~~GIpvp~g~~a~s~~ea~~~a~~ig~p~~VvKaQV~aGgRGKa~~~~~hk~~~GGV~l~~s~~ea~ 80 (398)
|||||||||+||++||||||+|.+++|++|+.+++++|+.|+||+|||||+||||||++. ++..|||++++|++|+.
T Consensus 1 M~l~EyqaK~ll~~~gipvp~g~~~~~~~e~~~~~~~l~~~~~VvKaQv~aGgRGKa~~~---~~~~GGVk~~~s~~ea~ 77 (395)
T 2fp4_B 1 MNLQEYQSKKLMSDNGVKVQRFFVADTANEALEAAKRLNAKEIVLKAQILAGGRGKGVFS---SGLKGGVHLTKDPEVVG 77 (395)
T ss_dssp CBCCHHHHHHHHHHTTCCCCCEEEESSHHHHHHHHHHHTCSSEEEEECCSSSCGGGCEET---TSCBCSEEEESCHHHHH
T ss_pred CCHHHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCC---CCCCCCEEEECCHHHHH
T ss_conf 960289999999986998999323289999999999709996899904225877546677---78888489959999999
Q ss_pred HHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEEEEEECCCCCEEEEEECCCCCCHHHHHHHCHHHHEEEECC
Q ss_conf 99998618765442122222443301103455565058999998347780489984478840245557483122033214
Q gi|254781049|r 81 SDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLID 160 (398)
Q Consensus 81 ~~a~~ilg~~l~t~qt~~~G~~v~~vLVEe~v~~~~E~ylgi~~Dr~~~~~vii~S~~GGvdIE~va~~~p~~I~~~~id 160 (398)
+++++|||++++|+||++.|++|++|||||+++|.+|||+|+++||++++|++|+|++||||||++|+++|++|.+.++|
T Consensus 78 ~~a~~~lg~~l~t~qt~~~G~~v~~vlvee~~~i~~E~Ylsi~iDr~~~~~~ii~S~eGGvdIEeva~~~p~~I~~~~i~ 157 (395)
T 2fp4_B 78 QLAKQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYLAILMDRSCNGPVLVGSPQGGVDIEEVAASNPELIFKEQID 157 (395)
T ss_dssp HHHHTTTTSEEECTTSCTTCEECCCEEEEECCCCSEEEEEEEEEETTTTEEEEEEESSCSSCHHHHHHHCGGGCEEEECC
T ss_pred HHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEEECCCCCEEEEEECCCCCCHHHHHHHCCCCEEEEEEC
T ss_conf 99999745224324357788242459999666654107999996268885699980788986556566441212246621
Q ss_pred CCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCEEEEEEEEEECCCHHHHHHHHH
Q ss_conf 44578957888788751988899885999999998999955975102326799059967994001321573556410278
Q gi|254781049|r 161 PLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ 240 (398)
Q Consensus 161 ~~~gl~~~~~~~l~~~lg~~~~~~~~~~~ii~~L~~~f~e~Da~liEINPLvvt~dg~vvAlDAKi~iDDnA~fR~~~~~ 240 (398)
|..+++++++++++..+|++++...++.+++.+||++|.++||+|+|||||++|++|+++|||||++|||||+|||+++.
T Consensus 158 p~~g~~~~~~~~~~~~lgl~~~~~~~~~~ii~~Ly~~F~e~Da~LlEINPLv~t~~g~~~aLDaK~~iDDnA~fR~~~~~ 237 (395)
T 2fp4_B 158 IIEGIKDSQAQRMAENLGFLGPLQNQAADQIKKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQKDIF 237 (395)
T ss_dssp TTTCCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEEECTTSCEEECSEEEEECGGGGGGCHHHH
T ss_pred CCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCEEECCCCCEEEEEEEECCCCCHHHHCCCHH
T ss_conf 44455536899999974996677788999999999999856823066011488699987972246224656565353212
Q ss_pred HHHCCCCCCHHHHHHHHCCCCEEECCCCEEEEECCCHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCC
Q ss_conf 63100015622245775398644228817999555036899999999658996248842788898999999999861998
Q gi|254781049|r 241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSS 320 (398)
Q Consensus 241 ~~~d~~~~~~~E~~A~~~~l~yv~LdG~Ig~~vnGaGlamatmD~i~~~Gg~pANFlD~gG~a~~e~~~~a~~~il~~~~ 320 (398)
++||+++++|.|.+|++++|+||+||||||||||||||||+|||+|+++||+||||||+||+||.++|++||+++++||+
T Consensus 238 ~~~d~~~~~~~E~~a~~~~l~yv~ldG~Ig~~vnGaGLaMaTmD~i~~~Gg~pANFlD~GG~a~~e~v~~a~~iil~d~~ 317 (395)
T 2fp4_B 238 AMDDKSENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFLDLGGGVKESQVYQAFKLLTADPK 317 (395)
T ss_dssp TTCCCTTSCHHHHHHHHTTCEEEECSSSEEEEESSHHHHHHHHHHHHHTTCCBCEEEECCSSCCHHHHHHHHHHHHHCTT
T ss_pred HCCCCCCCCHHHHHHHHCCCCEEECCCCEEEEECCCCHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCC
T ss_conf 13677559977899987598665147827898437642110257898715773315641788878999999999963999
Q ss_pred CCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHC
Q ss_conf 65899963586132899999999999972999879997489858999999997699589949989999999998506
Q gi|254781049|r 321 VKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397 (398)
Q Consensus 321 vk~iliNifGGI~~cd~vA~gii~a~~~~~~~~pivvRl~Gtn~~~g~~il~~~g~~~~~~~~~~~A~~~~v~~~k~ 397 (398)
||+|||||||||+|||+||+||++|+++.++++||||||+|||+++|+++|+++|+++++++||++||+++|++++.
T Consensus 318 vk~iliNIfGGI~~cd~vA~GIi~A~~e~~~~vpivVRl~Gtn~~eg~~iL~~sgl~i~~~~~l~~A~~kaV~~~~~ 394 (395)
T 2fp4_B 318 VEAILVNIFGGIVNCAIIANGITKACRELELKVPLVVRLEGTNVHEAQNILTNSGLPITSAVDLEDAAKKAVASVTK 394 (395)
T ss_dssp CCEEEEEEEESSSCHHHHHHHHHHHHHHHTCCSCEEEEEEETTHHHHHHHHHHTCSCCEECSSHHHHHHHHHHTTC-
T ss_pred CCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHC
T ss_conf 87899998087303599999999999961999878999998998999999997799748748999999999999636