HHsearch results for GI: 254781049 and protein with PDBid: 2fp4_B

>2fp4_B Succinyl-COA ligase [GDP-forming] beta-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.23.4.1 d.142.1.4 PDB: 2fpg_B* 2fpi_B* 2fpp_B* 1euc_B* 1eud_B*
Probab=100.00  E-value=0  Score=981.33  Aligned_cols=394  Identities=43%  Similarity=0.691  Sum_probs=387.6

Q ss_pred             CCCCHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHH
Q ss_conf             98657999999998689888815747999999999872998699971213687656565567777777079958999999
Q gi|254781049|r    1 MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVI   80 (398)
Q Consensus         1 M~L~EyqaK~lL~~~GIpvp~g~~a~s~~ea~~~a~~ig~p~~VvKaQV~aGgRGKa~~~~~hk~~~GGV~l~~s~~ea~   80 (398)
                      |||||||||+||++||||||+|.+++|++|+.+++++|+.|+||+|||||+||||||++.   ++..|||++++|++|+.
T Consensus         1 M~l~EyqaK~ll~~~gipvp~g~~~~~~~e~~~~~~~l~~~~~VvKaQv~aGgRGKa~~~---~~~~GGVk~~~s~~ea~   77 (395)
T 2fp4_B            1 MNLQEYQSKKLMSDNGVKVQRFFVADTANEALEAAKRLNAKEIVLKAQILAGGRGKGVFS---SGLKGGVHLTKDPEVVG   77 (395)
T ss_dssp             CBCCHHHHHHHHHHTTCCCCCEEEESSHHHHHHHHHHHTCSSEEEEECCSSSCGGGCEET---TSCBCSEEEESCHHHHH
T ss_pred             CCHHHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCC---CCCCCCEEEECCHHHHH
T ss_conf             960289999999986998999323289999999999709996899904225877546677---78888489959999999


Q ss_pred             HHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEEEEEECCCCCEEEEEECCCCCCHHHHHHHCHHHHEEEECC
Q ss_conf             99998618765442122222443301103455565058999998347780489984478840245557483122033214
Q gi|254781049|r   81 SDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLID  160 (398)
Q Consensus        81 ~~a~~ilg~~l~t~qt~~~G~~v~~vLVEe~v~~~~E~ylgi~~Dr~~~~~vii~S~~GGvdIE~va~~~p~~I~~~~id  160 (398)
                      +++++|||++++|+||++.|++|++|||||+++|.+|||+|+++||++++|++|+|++||||||++|+++|++|.+.++|
T Consensus        78 ~~a~~~lg~~l~t~qt~~~G~~v~~vlvee~~~i~~E~Ylsi~iDr~~~~~~ii~S~eGGvdIEeva~~~p~~I~~~~i~  157 (395)
T 2fp4_B           78 QLAKQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYLAILMDRSCNGPVLVGSPQGGVDIEEVAASNPELIFKEQID  157 (395)
T ss_dssp             HHHHTTTTSEEECTTSCTTCEECCCEEEEECCCCSEEEEEEEEEETTTTEEEEEEESSCSSCHHHHHHHCGGGCEEEECC
T ss_pred             HHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEEECCCCCEEEEEECCCCCCHHHHHHHCCCCEEEEEEC
T ss_conf             99999745224324357788242459999666654107999996268885699980788986556566441212246621


Q ss_pred             CCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCEEEEEEEEEECCCHHHHHHHHH
Q ss_conf             44578957888788751988899885999999998999955975102326799059967994001321573556410278
Q gi|254781049|r  161 PLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ  240 (398)
Q Consensus       161 ~~~gl~~~~~~~l~~~lg~~~~~~~~~~~ii~~L~~~f~e~Da~liEINPLvvt~dg~vvAlDAKi~iDDnA~fR~~~~~  240 (398)
                      |..+++++++++++..+|++++...++.+++.+||++|.++||+|+|||||++|++|+++|||||++|||||+|||+++.
T Consensus       158 p~~g~~~~~~~~~~~~lgl~~~~~~~~~~ii~~Ly~~F~e~Da~LlEINPLv~t~~g~~~aLDaK~~iDDnA~fR~~~~~  237 (395)
T 2fp4_B          158 IIEGIKDSQAQRMAENLGFLGPLQNQAADQIKKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQKDIF  237 (395)
T ss_dssp             TTTCCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEEECTTSCEEECSEEEEECGGGGGGCHHHH
T ss_pred             CCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCEEECCCCCEEEEEEEECCCCCHHHHCCCHH
T ss_conf             44455536899999974996677788999999999999856823066011488699987972246224656565353212


Q ss_pred             HHHCCCCCCHHHHHHHHCCCCEEECCCCEEEEECCCHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCC
Q ss_conf             63100015622245775398644228817999555036899999999658996248842788898999999999861998
Q gi|254781049|r  241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSS  320 (398)
Q Consensus       241 ~~~d~~~~~~~E~~A~~~~l~yv~LdG~Ig~~vnGaGlamatmD~i~~~Gg~pANFlD~gG~a~~e~~~~a~~~il~~~~  320 (398)
                      ++||+++++|.|.+|++++|+||+||||||||||||||||+|||+|+++||+||||||+||+||.++|++||+++++||+
T Consensus       238 ~~~d~~~~~~~E~~a~~~~l~yv~ldG~Ig~~vnGaGLaMaTmD~i~~~Gg~pANFlD~GG~a~~e~v~~a~~iil~d~~  317 (395)
T 2fp4_B          238 AMDDKSENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFLDLGGGVKESQVYQAFKLLTADPK  317 (395)
T ss_dssp             TTCCCTTSCHHHHHHHHTTCEEEECSSSEEEEESSHHHHHHHHHHHHHTTCCBCEEEECCSSCCHHHHHHHHHHHHHCTT
T ss_pred             HCCCCCCCCHHHHHHHHCCCCEEECCCCEEEEECCCCHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCC
T ss_conf             13677559977899987598665147827898437642110257898715773315641788878999999999963999


Q ss_pred             CCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHC
Q ss_conf             65899963586132899999999999972999879997489858999999997699589949989999999998506
Q gi|254781049|r  321 VKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG  397 (398)
Q Consensus       321 vk~iliNifGGI~~cd~vA~gii~a~~~~~~~~pivvRl~Gtn~~~g~~il~~~g~~~~~~~~~~~A~~~~v~~~k~  397 (398)
                      ||+|||||||||+|||+||+||++|+++.++++||||||+|||+++|+++|+++|+++++++||++||+++|++++.
T Consensus       318 vk~iliNIfGGI~~cd~vA~GIi~A~~e~~~~vpivVRl~Gtn~~eg~~iL~~sgl~i~~~~~l~~A~~kaV~~~~~  394 (395)
T 2fp4_B          318 VEAILVNIFGGIVNCAIIANGITKACRELELKVPLVVRLEGTNVHEAQNILTNSGLPITSAVDLEDAAKKAVASVTK  394 (395)
T ss_dssp             CCEEEEEEEESSSCHHHHHHHHHHHHHHHTCCSCEEEEEEETTHHHHHHHHHHTCSCCEECSSHHHHHHHHHHTTC-
T ss_pred             CCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHC
T ss_conf             87899998087303599999999999961999878999998998999999997799748748999999999999636