HHsearch results for GI: 254781049 and protein with PDBid: 2nu8_B

>2nu8_B SCS-beta, succinyl-COA synthetase beta chain; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, rossmann fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.23.4.1 d.142.1.4 PDB: 1scu_B* 2nu6_B* 1jkj_B* 2nu7_B* 2nu9_B* 2nua_B* 2scu_B* 1jll_B* 1cqj_B* 1cqi_B*
Probab=100.00  E-value=0  Score=966.55  Aligned_cols=387  Identities=51%  Similarity=0.822  Sum_probs=383.9

Q ss_pred             CCCCHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHH
Q ss_conf             98657999999998689888815747999999999872998699971213687656565567777777079958999999
Q gi|254781049|r    1 MNIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVI   80 (398)
Q Consensus         1 M~L~EyqaK~lL~~~GIpvp~g~~a~s~~ea~~~a~~ig~p~~VvKaQV~aGgRGKa~~~~~hk~~~GGV~l~~s~~ea~   80 (398)
                      |||||||||+||++||||||+|.+++|++|+.++++++++++||||||||+|||||+          |||++++|++|+.
T Consensus         1 M~l~EyqaK~ll~~~gipvp~g~~~~~~~e~~~~~~~l~~~~~VvKaQvlaGGRGKa----------GGVki~~s~~ea~   70 (388)
T 2nu8_B            1 MNLHEYQAKQLFARYGLPAPVGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKA----------GGVKVVNSKEDIR   70 (388)
T ss_dssp             CBCCHHHHHHHHHHTTCCCCCEEEESSHHHHHHHHHHHCSSCEEEEECCSSSCTTTT----------TCEEEECSHHHHH
T ss_pred             CCHHHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHHHHCCCCEEEECCCCCCCCCCC----------CEEEEECCHHHHH
T ss_conf             963499999999985998999427899999999999868995999855247887666----------7179969999999


Q ss_pred             HHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEEEEEECCCCCEEEEEECCCCCCHHHHHHHCHHHHEEEECC
Q ss_conf             99998618765442122222443301103455565058999998347780489984478840245557483122033214
Q gi|254781049|r   81 SDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLID  160 (398)
Q Consensus        81 ~~a~~ilg~~l~t~qt~~~G~~v~~vLVEe~v~~~~E~ylgi~~Dr~~~~~vii~S~~GGvdIE~va~~~p~~I~~~~id  160 (398)
                      +++++|||++++|+||+++|++|++|||||+++|.+|||+|+++||++++|++++|.+||||||++|+++|++|.++++|
T Consensus        71 ~~a~~~lg~~l~t~qt~~~G~~v~~vlvee~~~i~~E~Ylsi~~Dr~~~~~~ii~S~~GGvdIEeva~~~p~~i~~~~id  150 (388)
T 2nu8_B           71 AFAENWLGKRLVTYQTDANGQPVNQILVEAATDIAKELYLGAVVDRSSRRVVFMASTEGGVEIEKVAEETPHLIHKVALD  150 (388)
T ss_dssp             HHHHHHTTSEECCTTSCTTCEECCCEEEEECCCEEEEEEEEEEEETTTTEEEEEEESCTTSCHHHHHHHCGGGEEEEECB
T ss_pred             HHHHHHHCCCCEECCCCCCCCEEEEEEEECCCCCCCCEEEEEEECCCCCCEEEEEECCCCCCHHHHHHHCCCCCCCEEEC
T ss_conf             99999847320131347788276699997035765006999996377782699985689974655445384523003567


Q ss_pred             CCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCEEEEEEEEEECCCHHHHHHHHH
Q ss_conf             44578957888788751988899885999999998999955975102326799059967994001321573556410278
Q gi|254781049|r  161 PLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDIQ  240 (398)
Q Consensus       161 ~~~gl~~~~~~~l~~~lg~~~~~~~~~~~ii~~L~~~f~e~Da~liEINPLvvt~dg~vvAlDAKi~iDDnA~fR~~~~~  240 (398)
                      |..+++++++|.++..+|+++....++.+++.+||++|.++||+|+|||||++|++|+++|||||+++||||+||||+|.
T Consensus       151 ~~~g~~~~~~~~~~~~lg~~~~~~~~~~~~i~~Ly~~F~~~D~~llEINPLv~t~~g~l~aLDaK~~~DdnA~fR~~~~~  230 (388)
T 2nu8_B          151 PLTGPMPYQGRELAFKLGLEGKLVQQFTKIFMGLATIFLERDLALIEINPLVITKQGDLICLDGKLGADGNALFRQPDLR  230 (388)
T ss_dssp             TTTBCCHHHHHHHHHHTTCCTHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEEEETTSCEEESCCEEEECGGGGGGCHHHH
T ss_pred             CCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCEEEEEEEECCCCCCCCCCCHHH
T ss_conf             45578879999999864997377899999999999999856764045553135589978997635325665000492445


Q ss_pred             HHHCCCCCCHHHHHHHHCCCCEEECCCCEEEEECCCHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCC
Q ss_conf             63100015622245775398644228817999555036899999999658996248842788898999999999861998
Q gi|254781049|r  241 ELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIITSDSS  320 (398)
Q Consensus       241 ~~~d~~~~~~~E~~A~~~~l~yv~LdG~Ig~~vnGaGlamatmD~i~~~Gg~pANFlD~gG~a~~e~~~~a~~~il~~~~  320 (398)
                      +++++++++|.|.+|++++|+||+||||||||||||||||+|||+|+++||+||||||+||+||.|+|++||+++++||+
T Consensus       231 ~~~~~~~~~~~E~~a~~~~l~yv~ldG~Ig~mvnGaGlamaTmD~i~~~Gg~pANfld~gG~a~~e~v~~a~kiil~d~~  310 (388)
T 2nu8_B          231 EMRDQSQEDPREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVGGGATKERVTEAFKIILSDDK  310 (388)
T ss_dssp             HHCCGGGSCHHHHHHHHTTCEEEECSSSEEEEESSHHHHHHHHHHHHHTTCCBCEEEECCSCCCHHHHHHHHHHHHTSTT
T ss_pred             HCCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCC
T ss_conf             41476647976999876797632579738999658429999999999849984226873699978999999999865999


Q ss_pred             CCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHC
Q ss_conf             65899963586132899999999999972999879997489858999999997699589949989999999998506
Q gi|254781049|r  321 VKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG  397 (398)
Q Consensus       321 vk~iliNifGGI~~cd~vA~gii~a~~~~~~~~pivvRl~Gtn~~~g~~il~~~g~~~~~~~~~~~A~~~~v~~~k~  397 (398)
                      ||+|||||||||+|||+||+||++|+++.++++||||||+|||+++|+++|+++|+++++++||++||+++|+++||
T Consensus       311 vk~iliNIfGGI~rcd~vA~GIi~A~~~~~~~vpivVRl~Gtn~eeg~~il~~~gl~i~~~~~l~~Aa~~~V~~~~g  387 (388)
T 2nu8_B          311 VKAVLVNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRLEGNNAELGAKKLADSGLNIIAAKGLTDAAQQVVAAVEG  387 (388)
T ss_dssp             CCEEEEEEESCSSCHHHHHHHHHHHHHHHTCCSCEEEEEESTTHHHHHHHHHTTCSSEEECSSHHHHHHHHHHHTTT
T ss_pred             CCEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHCC
T ss_conf             65899996076455899999999999970999878999998998999999997899868708999999999998559