HHsearch alignment for GI: 254781050 and conserved domain: COG0074
>COG0074 SucD Succinyl-CoA synthetase, alpha subunit [Energy production and conversion].
Probab=100.00 E-value=0 Score=702.08 Aligned_cols=292 Identities=61% Similarity=1.022 Sum_probs=286.1
Q ss_pred CEEEEECCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCEEECCCCCCCCCCCCHHHHCCCCCCCEEEEECCH
Q ss_conf 95677179739998888437799999998626981899765899886872774577531407850357886368862120
Q gi|254781050|r 1 MSILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPP 80 (300)
Q Consensus 1 msil~~~~t~vivqGitg~~g~~~~~~~~~y~gt~ivagV~Pgkgg~~~~g~~~~iPvy~sv~ea~~~~~~D~avI~VP~ 80 (300)
T Consensus 1 m~il~~k~tkvivqGitg~~gtfh~~~~l~y-Gt~~V~GvtPgkgG~~~~g----~PVf~tV~EA~~~~~a~~svI~Vp~ 75 (293)
T COG0074 1 MSILLNKDTKVIVQGITGKQGTFHTEQMLAY-GTKIVGGVTPGKGGQTILG----LPVFNTVEEAVKETGANASVIFVPP 75 (293)
T ss_pred CCEEECCCCEEEEECCCCCCCHHHHHHHHHH-CCCEEECCCCCCCCEEECC----CCHHHHHHHHHHHHCCCEEEEECCC
T ss_conf 9446358974898336542003889999972-9856642368977438837----5478999999870289779996481
Q ss_pred HHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEECCCCEEECCCCHHCCEECCCCCCCCCEEEEEECC
Q ss_conf 45678899998539958998058846888999999840177189406851013555100020011235778679998054
Q gi|254781050|r 81 SGAGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSG 160 (300)
Q Consensus 81 ~~v~dai~Ea~~agik~iviiteGip~~d~~~l~~~A~~~g~riiGPNc~Gii~p~~~~lgi~p~~~~~pG~VgivSqSG 160 (300)
T Consensus 76 ~~aadai~EAida~i~liv~ITEgIP~~D~~~~~~~a~~~g~~iiGPncpGiI~Pg~~kiGimp~~i~~~G~IGiVSrSG 155 (293)
T COG0074 76 PFAADAILEAIDAGIKLVVIITEGIPVLDMLELKRYAREKGTRLIGPNCPGIITPGECKIGIMPGNIYKPGNIGIVSRSG 155 (293)
T ss_pred HHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCEEEECHHHHCCCCCEEEEECCC
T ss_conf 77899999998579957999959998889999999998669799879999637478533510523405788569996686
Q ss_pred CHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCEE
Q ss_conf 14789999999719951676405567446789999999997399872889997058724899999999864226755268
Q gi|254781050|r 161 TLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV 240 (300)
Q Consensus 161 ~l~~e~~~~~~~~g~G~S~~VsiG~D~~~G~~~~d~L~~~~~Dp~T~~Ivl~gEiGG~~E~~aa~fi~~~~~~~~~KPVv 240 (300)
T Consensus 156 TLTyE~~~qlt~~G~GqS~~IGiGGDpi~Gt~fid~L~~fe~Dp~T~~ivmiGEiGG~aEe~AA~~i~~~---~~~KPVV 232 (293)
T COG0074 156 TLTYEAVSQLTEAGLGQSTAIGIGGDPIPGTSFIDALEMFEADPETEAIVMIGEIGGPAEEEAAEYIKAN---ATRKPVV 232 (293)
T ss_pred CHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHH---CCCCCEE
T ss_conf 6399999999763885589998578876881599999986458674079999267993899999999963---4689869
Q ss_pred EEEEEECCCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHCC
Q ss_conf 998430157655322001122488889999999999889757889899999999998439
Q gi|254781050|r 241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELLGSL 300 (300)
Q Consensus 241 a~~~GrtAp~g~~~gHaGAi~~~~~g~a~~k~~al~~aGv~v~~s~~el~~~l~~~l~~l 300 (300)
T Consensus 233 a~iaG~tap~gkrmGhaGaiv~~~~gta~~Ki~al~~aGv~v~etp~~l~~~l~~vl~~~ 292 (293)
T COG0074 233 AYIAGRTAPEGKRMGHAGAIVSGGKGTAESKIAALEAAGVKVAETPAELGELLLEVLKGR 292 (293)
T ss_pred EEEECCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHCC
T ss_conf 998436798233012103433078765899999999759741179999999999986326