HHsearch alignment for GI: 254781050 and conserved domain: COG1042
>COG1042 Acyl-CoA synthetase (NDP forming) [Energy production and conversion].
Probab=100.00 E-value=9.8e-45 Score=305.74 Aligned_cols=273 Identities=24% Similarity=0.368 Sum_probs=227.0
Q ss_pred EEEECCCEEEEECCCCHHH---HHHHHHHHHHCCCCEEEEECCCCCCEEECCCCCCCCCCCCHHHHCCCCCCCEEEEECC
Q ss_conf 6771797399988884377---9999999862698189976589988687277457753140785035788636886212
Q gi|254781050|r 3 ILVDKNTKVLVQGLTGKAG---TFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVP 79 (300)
Q Consensus 3 il~~~~t~vivqGitg~~g---~~~~~~~~~y~gt~ivagV~Pgkgg~~~~g~~~~iPvy~sv~ea~~~~~~D~avI~VP 79 (300)
T Consensus 6 ~~~~p~s-vavigas~~~~~vg~~i~~nL~~~g-~g~i~PVnp~~~--~v~G----~~ay~s~~~lp~~--~dlav~~v~ 75 (598)
T COG1042 6 RLFAPKS-IAVIGASERPGKLGYEILRNLLEYG-QGKIYPVNPKYD--EVLG----VKAYTSVADLPDA--PDLAVIVVP 75 (598)
T ss_pred HHCCCCE-EEEEECCCCCCHHHHHHHHHHHHCC-CCCEEECCCCCC--CCCC----CCCCCHHHHCCCC--CCCEEEEEC
T ss_conf 1107763-7887146875215799999998568-885574276532--3366----3146407557888--770689852
Q ss_pred HHHHHHHHHHHHHCCCCEEEEECCCCCHHH------HHHHHHHHHCCCCEEEECCCCEEECCCCHHCCEECCCCC-C--C
Q ss_conf 045678899998539958998058846888------999999840177189406851013555100020011235-7--7
Q gi|254781050|r 80 PSGAGDAIIESIEAEIPLIVCITEGIPVLD------MVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIF-R--K 150 (300)
Q Consensus 80 ~~~v~dai~Ea~~agik~iviiteGip~~d------~~~l~~~A~~~g~riiGPNc~Gii~p~~~~lgi~p~~~~-~--p 150 (300)
T Consensus 76 ~~~~~~i~~~~~~kGv~~~i~is~gf~e~~~~~~~~e~~~~~~a~~~~~rligPn~~G~~~~~~g-lna~f~p~~~~~~~ 154 (598)
T COG1042 76 AKVVPEIVHELGEKGVKGAIVISAGFREAGEEGMELEKELVEAARKYGMRIIGPNCLGLINPIIG-LNATFDPVFGLGRG 154 (598)
T ss_pred HHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCC-CCCCCCCCCCCCCC
T ss_conf 44568999872005873589962456788776767788999998855963862332453112236-56312653233478
Q ss_pred CCEEEEEECCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHH
Q ss_conf 86799980541478999999971995167640556744678999999999739987288999705872489999999986
Q gi|254781050|r 151 GSVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDE 230 (300)
Q Consensus 151 G~VgivSqSG~l~~e~~~~~~~~g~G~S~~VsiG~D~~~G~~~~d~L~~~~~Dp~T~~Ivl~gEiGG~~E~~aa~fi~~~ 230 (300)
T Consensus 155 g~~afvsqsgav~~~il~~~~~~~~g~s~~vs~gn~ad~--~~~d~~~~~~~D~~tk~i~Ly~E--~~~--~~r~fl~~a 228 (598)
T COG1042 155 GGGAFVSQSGAVSFAILDWANEDGMGFSIKVSLGNAADR--DESDLLEYLADDPRTKAIGLYIE--GVK--DGRKFLNAA 228 (598)
T ss_pred CCEEEEEECHHHHHHCCCHHHHCCCCEEEEEEECCHHHC--CCHHHHHHHHHCCCCEEEEEEEC--CCH--HHHHHHHHH
T ss_conf 873799952578876165234268753699961425433--84466777752765307999842--544--279998899
Q ss_pred HHCCCCCCEEEEEEEECCCCCCC-CCEEEEECCCCCCCHHHHHHHHHHCCCEECCCHHHHHHHHHHH
Q ss_conf 42267552689984301576553-2200112248888999999999988975788989999999999
Q gi|254781050|r 231 AKRGRKKPIVGFVAGKTAPPGRT-MGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVEL 296 (300)
Q Consensus 231 ~~~~~~KPVva~~~GrtAp~g~~-~gHaGAi~~~~~g~a~~k~~al~~aGv~v~~s~~el~~~l~~~ 296 (300)
T Consensus 229 ~~~~~~kpii~lk~gr~~~~akAa~shTgsla----g~~~~y~Aa~~~agvir~~~~~elf~~~k~l 291 (598)
T COG1042 229 RAAERKKPIIALKAGRSEAGAKAAASHTGSLA----GSDEAYDAAFKQAGVIRVESIEELFDAAKAL 291 (598)
T ss_pred HHHHCCCCEEEEECCCCHHHHHHHHCCCCCCC----CCCCCCHHHHHHCCCEECCCHHHHHHHHHHH
T ss_conf 98735787799963478788899860261103----6420027988640722316749999999986