HHsearch alignment for GI: 254781050 and conserved domain: PRK00696
>PRK00696 sucC succinyl-CoA synthetase subunit beta; Provisional.
Probab=97.67 E-value=0.0014 Score=43.09 Aligned_cols=165 Identities=18% Similarity=0.282 Sum_probs=111.8
Q ss_pred HHHHHHHHCCCCEEEECCCCEEECCCC-----HHCCEE--------------------C----------CCCCCCCCEEE
Q ss_conf 999998401771894068510135551-----000200--------------------1----------12357786799
Q gi|254781050|r 111 VRVKARLEKSSSRLIGPNCPGILTPDS-----CKIGIM--------------------P----------GSIFRKGSVGI 155 (300)
Q Consensus 111 ~~l~~~A~~~g~riiGPNc~Gii~p~~-----~~lgi~--------------------p----------~~~~~pG~Vgi 155 (300)
T Consensus 182 ~~Ly~~F~~~Da~LvEINPLv~t~dg~~ialDaKv~iDDNAlfR~~~i~~~rd~~~ed~~E~~A~~~~lnyv~LdG~IG~ 261 (388)
T PRK00696 182 MGLYKAFVEKDASLVEINPLVVTKDGDLLALDAKITFDDNALFRHPDIAALRDPSQEDPREAEASKFDLNYVALDGNIGC 261 (388)
T ss_pred HHHHHHHHHCCCCEEECCCEEECCCCCEEEEEEEEECCCCHHHCCHHHHHCCCCCCCCHHHHHHHHCCCCEEEECCEEEE
T ss_conf 99999999659742561242686899789988898416752331866673268764897899998869735974576999
Q ss_pred EEECCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCHHH-HHHHH-HHHHHHHC
Q ss_conf 98054147899999997199516764055674467899999999973998728899970587248-99999-99986422
Q gi|254781050|r 156 LSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAE-EEAAQ-FLKDEAKR 233 (300)
Q Consensus 156 vSqSG~l~~e~~~~~~~~g~G~S~~VsiG~D~~~G~~~~d~L~~~~~Dp~T~~Ivl~gEiGG~~E-~~aa~-fi~~~~~~ 233 (300)
T Consensus 262 mvNGAGLaMaTmD~i~~~Gg~pANFLDvGG~a~~-e~v~~a~~ii~~d~~vk~IliNI-fGGI~rcd~vA~giv~A~~~~ 339 (388)
T PRK00696 262 MVNGAGLAMATMDIIKLHGGEPANFLDVGGGATK-ERVTEAFKIILSDPNVKAILVNI-FGGIMRCDVIAEGIVAAVKEV 339 (388)
T ss_pred EECCCCCCCHHHHHHHHCCCCCCEEEECCCCCCH-HHHHHHHHHHHCCCCCEEEEEEE-CCCCCCHHHHHHHHHHHHHHC
T ss_conf 9747644413589999759985425634899889-99999999986699950999993-688243999999999999964
Q ss_pred CCCCCEEEEEEEECCCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCC--EECCCHHHHHHHHHHHH
Q ss_conf 67552689984301576553220011224888899999999998897--57889899999999998
Q gi|254781050|r 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGI--CIAPSPARIGRSLVELL 297 (300)
Q Consensus 234 ~~~KPVva~~~GrtAp~g~~~gHaGAi~~~~~g~a~~k~~al~~aGv--~v~~s~~el~~~l~~~l 297 (300)
T Consensus 340 ~~~~PiVvRl~Gtn~e~g~~--------------------iL~~sgl~i~~~~~l~eAa~~aV~~~ 385 (388)
T PRK00696 340 GVKVPLVVRLEGTNVELGKK--------------------ILAESGLPIIAADSLMDAAQKVVAAV 385 (388)
T ss_pred CCCCCEEEEECCCCHHHHHH--------------------HHHHCCCCEEEECCHHHHHHHHHHHH
T ss_conf 99987899906788799999--------------------99978997487078999999999973