HHsearch alignment for GI: 254781050 and conserved domain: PRK05479

Probab=96.75  E-value=0.0053  Score=39.47  Aligned_cols=120  Identities=23%  Similarity=0.312  Sum_probs=88.3

Q ss_pred             CCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCEEECC-CCCCCCCCCCHHHHCCCCCCCEEEEECCHHHHHHH
Q ss_conf             97399988884377999999986269818997658998868727-74577531407850357886368862120456788
Q gi|254781050|r    8 NTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTG-GNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDA   86 (300)
Q Consensus         8 ~t~vivqGitg~~g~~~~~~~~~y~gt~ivagV~Pgkgg~~~~g-~~~~iPvy~sv~ea~~~~~~D~avI~VP~~~v~da   86 (300)
T Consensus        17 ~k~iaViGY-GsQG~AhAlNLrD-SG~~V~vglr~g--s~S~~kA~~dGf~v~-~~~eA~~~--aDii~~L~PD~~q~~v   89 (336)
T PRK05479         17 GKKVAIIGY-GSQGHAHALNLRD-SGVDVVVGLREG--SKSWKKAEADGFEVL-TVAEAAKW--ADVIMILLPDELQAEV   89 (336)
T ss_pred             CCEEEEECC-CCHHHHHHHHHHH-CCCCEEEEECCC--CCCHHHHHHCCCEEC-CHHHHHHH--CCEEEEECCHHHHHHH
T ss_conf             997999752-7076898855374-499779997999--803999998799436-79999974--6866542875778999


Q ss_pred             HHHHHHCCCC--EEEEECCCCCHHHHHHHHHHHHCCCCEEEECCCCEEECCC
Q ss_conf             9999853995--8998058846888999999840177189406851013555
Q gi|254781050|r   87 IIESIEAEIP--LIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILTPD  136 (300)
Q Consensus        87 i~Ea~~agik--~iviiteGip~~d~~~l~~~A~~~g~riiGPNc~Gii~p~  136 (300)
T Consensus        90 y~~~I~p~lk~G~~L~FaHGFnIhy--~~I~pp~~vDVimVAPKgpG~~VR~  139 (336)
T PRK05479         90 YKEEIEPNLKEGAALAFAHGFNIHF--GQIVPPADVDVIMVAPKGPGHLVRR  139 (336)
T ss_pred             HHHHHHHHCCCCCEEEEECCCHHCC--CEEEECCCCCEEEECCCCCCHHHHH
T ss_conf             9999985458997688614430005--6044458976799888999768999