HHsearch alignment for GI: 254781050 and conserved domain: PRK06091
>PRK06091 membrane protein FdrA; Validated.
Probab=97.41 E-value=0.011 Score=37.44 Aligned_cols=224 Identities=16% Similarity=0.217 Sum_probs=121.0
Q ss_pred CCCCEEECCCCCCCCCCCCHHHHCCCCCCCEEEEEC----CHHHHHHHHHHHHHC-CCCEEEEECCCCCHH--H-----H
Q ss_conf 998868727745775314078503578863688621----204567889999853-995899805884688--8-----9
Q gi|254781050|r 43 KKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYV----PPSGAGDAIIESIEA-EIPLIVCITEGIPVL--D-----M 110 (300)
Q Consensus 43 gkgg~~~~g~~~~iPvy~sv~ea~~~~~~D~avI~V----P~~~v~dai~Ea~~a-gik~iviiteGip~~--d-----~ 110 (300)
T Consensus 225 GtGGRDLs~eVGGis~l~al-~aL~~-Dp~T~vIvlISKPPa~eV~~kVl~~~~~~~KPVV~~FLG~~p~~~~e~~~~~a 302 (555)
T PRK06091 225 GLGGRDLSREVGGISALTAL-EMLSA-DEKSEVLAFVSKPPAEAVRLKIINAMKATGKPVVALFLGYTPAVAREENVWFA 302 (555)
T ss_pred CCCCCHHHHHHCCHHHHHHH-HHHHC-CCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCEEHH
T ss_conf 37774025675337899999-99855-99832999965899789999999999842998899972799765676764124
Q ss_pred HHHHHHHHCCCCEEEECCCCEEECCCCHHCCEECCCCCCCCCE-EEEEECCCHHHHHHHHHHHCCCC-------------
Q ss_conf 9999984017718940685101355510002001123577867-99980541478999999971995-------------
Q gi|254781050|r 111 VRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSV-GILSRSGTLTYEAVFQTSQEGLG------------- 176 (300)
Q Consensus 111 ~~l~~~A~~~g~riiGPNc~Gii~p~~~~lgi~p~~~~~pG~V-givSqSG~l~~e~~~~~~~~g~G------------- 176 (300)
T Consensus 303 ~tL~eaA~~A-v~l~~-----~~~--~--~~~~~~--~~~~~irGLys-GGTLa~EA~~ll~~~-l~~~~~~~~~~g~~l 368 (555)
T PRK06091 303 STLDEAARLA-CLLSR-----VTA--R--RNAIAP--VSSGFICGLYT-GGTLAAEAAGLLAGH-LGVEADDEHHHGMML 368 (555)
T ss_pred HHHHHHHHHH-HHHCC-----CCH--H--HCCCCC--CCCCEEEEEEC-CCHHHHHHHHHHHHH-HCCCCCCCCCCCCHH
T ss_conf 4299999998-74405-----520--1--102568--77773799953-712999999999987-099888533544111
Q ss_pred ---EEEEEECCCCC--------CCCCC-HHHHHHHHHCCCCCCEEEEEEECC-CHHH---HHHHHHHHHH---HHCCCCC
Q ss_conf ---16764055674--------46789-999999997399872889997058-7248---9999999986---4226755
Q gi|254781050|r 177 ---QSTAVGIGGDP--------VKGTE-FIDVLELFLADEATESIVMVGEIG-GSAE---EEAAQFLKDE---AKRGRKK 237 (300)
Q Consensus 177 ---~S~~VsiG~D~--------~~G~~-~~d~L~~~~~Dp~T~~Ivl~gEiG-G~~E---~~aa~fi~~~---~~~~~~K 237 (300)
T Consensus 369 ~s~gH~iiDlGDD~fT~GRPHPMIDPs~R~e~i~~~a~Dp~v~VILlDvVLGyGah~DPag~L~paI~~a~~a~~~gr~l 448 (555)
T PRK06091 369 DADGHQIIDLGDDFYTVGRPHPMIDPTLRNQLIADLGAKPQVRVLLLDVVIGFGATADPAASLVSAWQKACAARSDNQPL 448 (555)
T ss_pred HCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCE
T ss_conf 05895698657742357898888682779999999734997228999875326899984899999999999755338963
Q ss_pred CEEEEEEEECCCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCEECCCHHHHHHHHHHHH
Q ss_conf 268998430157655322001122488889999999999889757889899999999998
Q gi|254781050|r 238 PIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL 297 (300)
Q Consensus 238 PVva~~~GrtAp~g~~~gHaGAi~~~~~g~a~~k~~al~~aGv~v~~s~~el~~~l~~~l 297 (300)
T Consensus 449 ~vVa~V~GT~~DPQ---------------~~~~Q~~~L~~AGv~V~~SNa~A~~~A~~l~ 493 (555)
T PRK06091 449 YAIATVTGTERDPQ---------------CRSQQIATLEDAGIAVVSSLPEATLLAAALI 493 (555)
T ss_pred EEEEEEECCCCCCC---------------CHHHHHHHHHHCCEEEECCCHHHHHHHHHHH
T ss_conf 89999807888973---------------8999999999689599757399999999970