HHsearch alignment for GI: 254781050 and conserved domain: PRK07366
>PRK07366 succinyldiaminopimelate transaminase; Validated.
Probab=93.99 E-value=0.55 Score=26.62 Aligned_cols=76 Identities=16% Similarity=-0.016 Sum_probs=55.6
Q ss_pred CCCCCCHHHHCCCCCCCEEEEECCHH----H--HHHHHHHHHHCCCCEEEEECCCC------CHHHHHHHHHHHHCCCCE
Q ss_conf 75314078503578863688621204----5--67889999853995899805884------688899999984017718
Q gi|254781050|r 56 VPVFTTVAEAKERTAANASVIYVPPS----G--AGDAIIESIEAEIPLIVCITEGI------PVLDMVRVKARLEKSSSR 123 (300)
Q Consensus 56 iPvy~sv~ea~~~~~~D~avI~VP~~----~--v~dai~Ea~~agik~iviiteGi------p~~d~~~l~~~A~~~g~r 123 (300)
T Consensus 123 ~P~Y~~y~~~~~~--~G~~~~~vpl~~~~~~~~d~~~l~~~i~~~tk~iil~~P~NPTG~v~s~~~l~~i~~~a~~~~i~ 200 (388)
T PRK07366 123 DPGYPSHAGGVYL--AGGQIYPMPLRAENDFLPVFADIPTEVLAQARLMVLSYPHNPTTAIAPLSFFQEAVAFCQQHDLV 200 (388)
T ss_pred CCCCCCHHHHHHH--CCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCEEEECCCCCCCCEEEEHHHHHHHHHHHHHCCEE
T ss_conf 5877651899998--59857997546667984799999874042282999858989846680388888899987405507
Q ss_pred EEECCCCEEE
Q ss_conf 9406851013
Q gi|254781050|r 124 LIGPNCPGIL 133 (300)
Q Consensus 124 iiGPNc~Gii 133 (300)
T Consensus 201 lisDEiY~~l 210 (388)
T PRK07366 201 LVHDFPYVDL 210 (388)
T ss_pred EECCCEEEEE
T ss_conf 8622021445